NONHSAT022507
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT022507 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1222 nt |
Genomic location |
chr11+:67889103..67897958 |
Exon number |
4 |
Exons |
67889103..67889670,67896548..67896655,67897317..67897549,67897646..67897958 |
Genome context |
|
Sequence |
000001 GCGGGGGGCG CCGGGAGAGC GCCTCCGCGG TGGGACGGAG CCGGACTGGG CCGAGCGAGG GAGGCTCCTG AGCCTCGGAG 000080
000081 GACCCCGGGG TTGGCTTTGG GAGCTGAAAG TTTCCTTGGA CCCCTCGGAA GCCCCGTGAC ATCAGAGGCC GGGCCTGGCA 000160 000161 GGGGCAGGCA GGAAACGTGT CTGGAGGCTA CTGCCCTCTC CGCGTGACCT TGGGCGAGCA GCCTCCTCCT GGGGCTCAGT 000240 000241 GGGTGTGATT TTGTAACATT TCCCAGCGCT GCCACAGGCG CGTCTCGCCC TGTCCAACGC GGAGCCCGAA GAATTACTAA 000320 000321 GAAACCGAGG TCTGAAGGAG GGAAGAGGTG ACGGGCTCGA GGCCACACGG TGGGCCAGGC TGGGCCCGGC TGCACGCCGG 000400 000401 CTACCGGGGC CCAGCCCTCT GCACGCCTCC CGCAGCCTCA GTTTCCCTGT CCGTGGTACT GAGGATGCTC GGGCCTAGAA 000480 000481 GTTCAGGGCT GGAGGCCCAG GGACCGTCGA GGGAGGGGCA TCATCCCCGC CATGGGGCCG CCGCAACTGC CCAGAGCACA 000560 000561 GGCCAAAGAC CCCTGAGGCC CCCTCCTCCT TCAGAGCATG CACGTCGCAA ATTCTCAATG ACTGTTTGGA GGAATGAATA 000640 000641 AATGAATTGT GAACAAATGG TCTGAAGATT CCAGAGgcac accagaagac tacatttcct agccccccac ccccttgcag 000720 000721 tgtctgggac catgtgactC CTTAATTAGG TCACTTCTCT CTCCTGGGAG GCCCTCTCTG CCCTCTCTAA GTCTAACTAG 000800 000801 TGGCAAagga tctaagggaa gaaacctggc agagttacta gtcccaagaa gcctgggtcc ctgaatcacc acatggaagt 000880 000881 ctacgcgccc accacctgaa tggactaagg aagctgcagg atgaagacaa cagcatcaca aggaggaagc caggatccct 000960 000961 gtgttaccac aaggaggaga gatgcctaac caagaccgtc tgcaaggatt ttgtgtgagc cagaagcaga gctgtatggt 001040 001041 gttcagccac tgagatttga gggctgtttg ttacagcagt tgacctatcc tgactgacac aTCACATCAT TCCTTTCCCC 001120 001121 ACCAtgtgtc taacatgcta ccaaattgaa ttttaagtaa attagtactt ataaattaag tacaaatgct tttcaaattc 001200 001201 acatgaatct ttggtaaata aa |
Predicted Small Protein
Name | NONHSAT022507_smProtein_464:640 |
Length | 59 |
Molecular weight | 6365.0284 |
Aromaticity | 0.0344827586207 |
Instability index | 67.2224137931 |
Isoelectric point | 11.7819213867 |
Runs | 7 |
Runs residual | 0.035903751421 |
Runs probability | 0.0130466601055 |
Amino acid sequence | MLGPRSSGLEAQGPSREGHHPRHGAAATAQSTGQRPLRPPPPSEHARRKFSMTVWRNE |
Secondary structure | LLLLLLLLLLLLLLLLLLLLLLLLLLEEELLLLLLLLLLLLLLHHHLLEEEEEEEELL |
PRMN | - |
PiMo | - |