NONHSAT022702

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT022702

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1466 nt

Genomic location

chr11+:71425473..71455704

Exon number

4

Exons

71425473..71425604,71433219..71433354,71450954..71451054,71454608..71455704

Genome context

Sequence
000001 GAAAATAGTT TCCGATCTTT GGGATTCCCG AGATGGTCCA ATCTGCAAAA AGTTCATTGC CATTTCCATC AAGGACACTG 000080
000081 AGAACAAGAG TCTTATCCGG ATTGGATCCT GGGAATTGAG AAGCTTCAGC AGGGCTTCCG CTGGGACTAG GATCAGGATG 000160
000161 TGGACACCCC CAACCTGGAC CGTCTGGCCG GGGAGGGCGT CAAGGCCAAG TACCTCATGC CGCCCCTTGT CACAATGACC 000240
000241 TCCCCGTCCC ACCTCACTGC CATCCCAGat cttcttggct tagcagctgc agaccgacag tgcccgatcg atcacctcgg 000320
000321 aagcctacag gaccatcaca gacgctctac gttactctca cagtggaaca gcacggctct ttgctgctaa agtcacccag 000400
000401 aacgggagtc attgtgaccc ttacggtccc ccgagaggaa gaatggagac ttttcttaac tgtgtggggc caagagataa 000480
000481 gaccagctct ggctaagcgg tgccaagagt gtgggcggaa gacaaccctc cagggtttgc agtcaaccaa gcccccgtac 000560
000561 ttatagaagt taagcctagg gcccagccgg ttaggcaaaa acaggagccg gtccccagag aagctcttga aggtatccag 000640
000641 gtccatctca agcacctaag aagttttgga attagaggtc cttgtcagtc tccatggaac actcccctcc tgcctgttcc 000720
000721 caagcctaag accaaggact actggccggt acaggatttg cgcttggtta atcaggctac agtgacttta catccagcag 000800
000801 tacctaaccc gtacacattg ctggggttgc tgccagctga ggacagctgc ttcaccttct tggacctgaa agatgctttc 000880
000881 tttagcatca gattatcccg agagccagaa gctgtttgct ttcagtgggc agatccagag tcaggtgtca ctactcagta 000960
000961 cacttggacc gggcttcccc aagggttcaa gaactccccc accatcttcg gggaggcatt gcctcaagac ctccagaagt 001040
001041 ttcccaccag agacctagac tgcgtgttgc tccagtacgt tgatgatctt ttgctgggac accccatggc agtcgggtgc 001120
001121 accaaaggaa cagatgctct actccggcac ctggaggact gtgggtataa gatgtccaag aaaaaagctt agatctgccg 001200
001201 acagcaggta cattacttag gatttactat ccgaaagtgg gagacagcct aggatcagaa agaaacaggt catttgaaat 001280
001281 ctactggagc ctaagaccag aaggcaggtg agagaattct tatgggctgt ggggttttga agactgtaga tcccaaaatt 001360
001361 tgcagtataa gccaagcctt tgtatgaggt cacaaaggga gggggaacgg gaacgttttg aatggggatt ccagcaacag 001440
001441 caaggctttc atgagttaaa ggaaaa
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Predicted Small Protein

Name NONHSAT022702_smProtein_872:1057
Length 62
Molecular weight 6538.337
Aromaticity 0.0819672131148
Instability index 70.7557377049
Isoelectric point 9.62298583984
Runs 9
Runs residual 0.00527605049934
Runs probability 0.0369192722133
Amino acid sequence MLSLASDYPESQKLFAFSGQIQSQVSLLSTLGPGFPKGSRTPPPSSGRHCLKTSRSFPPE
T
Secondary structure LLLLLLLLLHHHHHHHHLLLLHHHHLHHHLLLLLLLLLLLLLLLLLLLEEELLLLLLLLL
L
PRMN -
PiMo -