NONHSAT023136
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT023136 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1826 nt |
Genomic location |
chr11-:75523525..75525951 |
Exon number |
2 |
Exons |
75523525..75524906,75525508..75525951 |
Genome context |
|
Sequence |
000001 AAGGGAAAGA GGGGTGGGGT CTTGATTAGG TAGAGCGCGC TTCTGGGCTC CGGTGTCACG TGCAGGAGGC GGGAGAGTCA 000080
000081 CCTGATTAGG GAGAACCGGT CTTCTGAGCC ACTTCCGCCC TCACTGGTTG CCGTGGTAAC AGGCCTCCGG TGGAGGGCGG 000160 000161 GGACCCTCGG AAGCCAGCTG GGTGGCGATC GCTTGTCTGC CTTGGCAGGC CCCTTGTGCA GTCTTTTCCC GGCGTGAGCG 000240 000241 TGCAGGGATT GAAAAGGAAT GCTTTATGGT TCAGCAGAGA GCCACCACGC AGGATGCACT GGGACCTGAG AACCGTCGGG 000320 000321 CAGTCCCACG AGCTCTTTCA TGACCAGCTC CAACCGACAA GTACACGCCC CTTCGCACTC CACTAGCTAG TAAGCTGAGC 000400 000401 TACAAGGTGT GCCAGGCACC CAGGACGCCG ATTCACCGCT TCAGTGaagg cccagctcaa atgccacctc ttccatgaag 000480 000481 acttccgtga tccACAATGA TAGCATCTCC AGCAATTGCT TCTATAATGA ATAGCATGAG TCATTCTGCA GGATGTTGAT 000560 000561 CTTCCTTTTT TTACTCCTAG ACTGAATTTT TCCACCACCT GGATGAACAT agcagaaaga acatagtgtt ttagagtcag 000640 000641 acacaatagg aatcaggcac tttggaatct tggctctacc acctttgagc tatgtatccc aaggcaagtc acttcccctc 000720 000721 tctcagcttt aaaatagtaa taggattgct gtagggatta aagtaaatca acatatgtaa agtgcccaca caggacctgg 000800 000801 catatagtag ttgcatttta aattttttaa acaaaATGTA AGCATACTAT CTTTCCAGGG TGTTCAGAAG CCTGAAAAAC 000880 000881 ACCTTGGATC TTTTCTCAGA GCTGGATCAC AAAGATGTCA CACTGTCTCC TGTTCTGACA CACTGAGTGG TTCCTCATGG 000960 000961 CTGGAGCCTG GGGCGTGTGG TCAGGTGTTT GTTGAGAAAG GAGTCGCTTG ATCAGGTGTT TGTTGAGAAA GGAGTCACTG 001040 001041 GGAAATCCCA AATATTATCT GATTGAACTC ATGTGGTGCC AAGATCTGGG GGAATTTCAC AGAAAACACA TTTCTGTTTC 001120 001121 TAAGCtgtat tagttttctg aggctgccat aacacattat cacaaTTCTT Gcttgagccc aagaatttgg gaccagcctg 001200 001201 ggcaacatgg caaaaccttg tctctacaaa aatacaaaaa ttagcccagc atgtcgtttt cacctatagt cccagctact 001280 001281 gaggaggctg aggtgggagg attacctgag cctggggagg ttgaggctgc agtgagtcaa gatcatgcca ctgtactcca 001360 001361 gcttgggcaa cagactgaga ccccatatca aaaacaaaCG AAGAGTGATC ATCCAGTTAC TCACTGCTgg gtctgaggga 001440 001441 agcccaaagg cagtgggagc cagagaaaat agttgagagt cagatttcac agtggaggtg acattgaaac agggtattga 001520 001521 agggccaata agagttcacc aagtcaggag agagggagga aaggacattc cagcagagag CAGGatctat tctttccaca 001600 001601 agcctttact gaggttcacc tttgcacagg ctagctactg ggttctggaa atgcagagct caagtaaaca acccttctcc 001680 001681 cACTTTTCCC AAATGCCGAA AACATTAGGA GAACTAGGAC TCTCATCCCT AGGGGCATTG GGAAGAACTC AAAAGCCTGC 001760 001761 TGCTTGCAAA GTATTCAAGA TGatgtaaag catttaacac actgtctggg agatagtaca ttttta |
Predicted Small Protein
Name | NONHSAT023136_smProtein_1250:1435 |
Length | 62 |
Molecular weight | 6587.1875 |
Aromaticity | 0.0491803278689 |
Instability index | 71.8590163934 |
Isoelectric point | 4.46722412109 |
Runs | 12 |
Runs residual | 0.0439042773695 |
Runs probability | 0.0382735676853 |
Amino acid sequence | MSFSPIVPATEEAEVGGLPEPGEVEAAVSQDHATVLQLGQQTETPYQKQTKSDHPVTHCW V |
Secondary structure | LLLLLLLLLLLLEEELLLLLLLEEEEEEELLLLEEHHHLLEELLLLLLLLLLLLLLEEEE L |
PRMN | - |
PiMo | - |