NONHSAT023405
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT023405 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
1232 nt |
Genomic location |
chr11-:82972498..82978514 |
Exon number |
3 |
Exons |
82972498..82973008,82976907..82977021,82977909..82978514 |
Genome context |
|
Sequence |
000001 gggcatgcat cacgaagttc tcgtgccatg gttttcagct ccatcaggtc atttaaggtc ttctctacac tgtttattct 000080
000081 agttagccat tcgtctaatc ttttttcaag gtttttagct tccttgcaat gggttcaaac atcctccttt accttggagg 000160 000161 agtttgttat taccgacctt gtgaagcctg cttctgtcaa ctcatcagtc attctcagtc cagttttctt cttgccattg 000240 000241 ctggcaagga gctgcaatcc tctggaggag aagaggcact atgattttta gaattttcag cttttctgct ctggtttttc 000320 000321 cccatctttg ttgttttatc tacctctggt ctttgatgtt ggtgacctac agatggggtt ttggtgtaga tgaccttttt 000400 000401 gttgatgttg atgctattcc tttctgtttg ttagttttcc ttctaacagt caggaccctc agctgcaggt ctgttggagt 000480 000481 ttgctggagg tccactccag accctgttta cctgggtatc accagcagag gctgcagaac agcaaatatt gctgcctgat 000560 000561 ccttcctctg gaagctttgt cccagaggtg cagccgccta tatgagGATA CTCAAACCAA AAGTATTATT TCAGAGACCA 000640 000641 GTAATAAAAT TGACGCTGAA ATTGCTTCCT TAAAAACACT GATGGAATCT AACAAACTTG AGACAATTCG TTATCTTGCA 000720 000721 GCTTCGGTGT TTACTTGCCT GGCAATAGCA TTGGGATTTT ATAGATTCTG GAAGTAGTAT TAATGCTCAT CCTGCTGTGG 000800 000801 CTGTTGGCTT CTTAGAACAC CAAACCGGGA GAGATTTACT TTGAACATTG TCAGTTGCAG CAAAAATTTA CTACACAAGA 000880 000881 TTATTCGAAG TGTATACGGA CTAAAAGAGG AAGTGTTTTA GAATGAGAAG AGATACTGTG TCTTTATTGT GTGTGTGTGA 000960 000961 GTGCAGGTGT GTGTCTTTAT TATATTGAAA AGCTGTCACT CAGACCTGGT TTGAGATAGA AGAGCATTTT GTCCTTTTGA 001040 001041 TAGTTAATAG AAATTGAACC AGAGTTTTCT TATGTTTGCT TGAACAGTTG TGTAAATCAT ACAGGATTTT GTGGGTATTG 001120 001121 GTTGAATATT TGTAAACCAT TCCCTAGCCT ACATATTTAT TACTGAATTA ACTTTCCTGA TAACCATTGC ATAATTACAT 001200 001201 TTTTCTATAA AATGAAAGAT TATTACAACA AA |
Predicted Small Protein
Name | NONHSAT023405_smProtein_128:283 |
Length | 52 |
Molecular weight | 5459.2339 |
Aromaticity | 0.0980392156863 |
Instability index | 73.7764705882 |
Isoelectric point | 4.90252685547 |
Runs | 10 |
Runs residual | 0.0418365365948 |
Runs probability | 0.0324677618795 |
Amino acid sequence | MGSNILLYLGGVCYYRPCEACFCQLISHSQSSFLLAIAGKELQSSGGEEAL |
Secondary structure | LLLHHHEELLLEEELLLLHHHHHHHHHLLLHHHHHHHHHHHHHLLLLLLLL |
PRMN | - |
PiMo | - |