NONHSAT023509
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT023509 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
937 nt |
Genomic location |
chr11+:86667442..86711766 |
Exon number |
3 |
Exons |
86667442..86667484,86669024..86669068,86710918..86711766 |
Genome context |
|
Sequence |
000001 CTTCTGCTTC GGCTCCTAGG GATCTGGGGA TCATGTGACC CAGaaactga tgctctgaga ggccaagcag tttgcccaag 000080
000081 attacacaGT CATAGCCGTG CCTGGGAGAA CCTTCTCTTC AACTCTGCCG CACCACTGTC AAGCTCACCT TTCTTCTAAG 000160 000161 GTTTTATTTT AGAGTTAACA TCCTCCAAAA AGCCTTCCTC AGGAGTTGAA GGTGCCCCTA ATATCACAGC CATGGCATCC 000240 000241 TGTACACTGG ACCTTATTGT CTGTCTGCCT GTTGTACCTT GTATGAGTCT ATAAGCAAAA CCTATAAGAA GCCACATCTG 000320 000321 GCTATTCTAT GTACTCAAAA AATAATTGGC AAGTGAAAGA ATGAGGAAAA GGAGAAAAAA TTCAGAAGGC CCCTACCCCT 000400 000401 TCCAATGGGT CAAGTCAGGA ATTTCCTACC TGCATGTGAT TCCCTGTGTC CTAGAGGGTT TTATTTACTC CTCAGACCTT 000480 000481 GGAAACTGTT AACCAGAGTC TCTGTTTGGA GATCTTATCT GTGTGCTTCT CCATGGGTGT TGTTTCCCTG TCTCTGCAGC 000560 000561 CATGCATTCC TCAGCTCTTT AAGTGGTGGA GCCTGTCTGC CTGGATAGAG TGCAAAAGCT ACAGTGTAAT CTTGCTTTCT 000640 000641 TTCAGGGCCA CTGACCAGAG GAAATAAAAA CTGGACTGAT TGGGCTCTCC TGATGTAGAC CAGCCAGTGG CCCTCTAAGT 000720 000721 TTCCTTCTAT GTTTAAAATT CCTTATCTGA CATTGCTAGC TGATCAGCAG GCCCACAGGT CAGCTGAGGG CTTATCTCCA 000800 000801 GGGCTGGAGC TTCAAAGAGA TACATGCACA CGACTCCCCT GGGTCAGATG GGCTGTGTCA CAGTGAGTTG GGGATAATTT 000880 000881 GGGATCAGTC AACATAACAC ACATAACACA ACCCATTAAT TTTTTTTTTC AAAAAGC |
Predicted Small Protein
Name | NONHSAT023509_smProtein_404:607 |
Length | 68 |
Molecular weight | 7462.8537 |
Aromaticity | 0.134328358209 |
Instability index | 67.5807462687 |
Isoelectric point | 9.17816162109 |
Runs | 12 |
Runs residual | 0.0357896381965 |
Runs probability | 0.0386931048697 |
Amino acid sequence | MGQVRNFLPACDSLCPRGFYLLLRPWKLLTRVSVWRSYLCASPWVLFPCLCSHAFLSSLS GGACLPG |
Secondary structure | LLLLLLLLLLLLLLLLLLLEEEELLHHHHHEEEEHHHEEELLLEEEELLLLLHHHHHLLL LLLLLLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHHLLL LLLLLLL |
PiMo | iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTTTTTTooo ooooooo |