NONHSAT023519
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT023519 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
646 nt |
Genomic location |
chr11-:87040449..87041094 |
Exon number |
1 |
Exons |
87040449..87041094 |
Genome context |
|
Sequence |
000001 AGATGGAGGA ACTTAGTTAC AGCTTCTCGC TGACTACATT GGGCCTGTCT AGTAAATTTG TCCATATTGA ATAGGCTTTG 000080
000081 GCTGCTCTAG CTGGAAAAGC CCTTTCAGTG GGAGTTAAAG CAGCAAATGG CATGGTATTA GCAACTGAGA AGAGCAGAAA 000160 000161 TCTATTCTAT ATGATGAGCA AAGTGTACAC AGAGTGGAAC CAATTACCAA ACATACAGGT TTGGTGTATA GTGGCATGGG 000240 000241 TGCAGATTAC AGAATGCTTG TGCATGGAGT TCAAAAGCTA GCTGAGCAAT ACTATCCTGT TTACCAAGAA CCCATTCCCA 000320 000321 CAACTCAGCT GGTAGAGAAA TTAGCTTCTG AGATGCAAGA ATACACCGAG TCTGGTGGTA TTTGTCCATT TGGAGTCTTT 000400 000401 CTACCTATTT GTGGTTGTGG GGGACAGACA TATTTACTCA GGCAGATCCA TCTGGAGCTT TCTTTGAATG CCACAGCAAT 000480 000481 GGGAAAGAAC TGTGTGACTG GGAAAACTTT CTTTGAGAGA AGAAACAATG AAGATCTGAA ATTTAAAATG CCATTCATAT 000560 000561 AGCCATCTTA ACCCTAAAGG AAAGTGTTAA AAGGCAAATG ACAGAAGATA ACATAGAAGT TGGAATCTGC AATGAAGCTG 000640 000641 TATTTA |
Predicted Small Protein
Name | NONHSAT023519_smProtein_131:280 |
Length | 50 |
Molecular weight | 5906.9785 |
Aromaticity | 0.142857142857 |
Instability index | 69.3226530612 |
Isoelectric point | 6.04180908203 |
Runs | 10 |
Runs residual | 0.0420297848869 |
Runs probability | 0.0343490549374 |
Amino acid sequence | MVLATEKSRNLFYMMSKVYTEWNQLPNIQVWCIVAWVQITECLCMEFKS |
Secondary structure | LEEEEELLHHHHHHHHHHHHHHHLLLLLEEEEEEEEEELLHHHEEEELL |
PRMN | - |
PiMo | - |