NONHSAT023536

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT023536

Source

NONCODE4.0

Same with

,

Classification

intronic(S)

Length

2134 nt

Genomic location

chr11-:87898747..87900859

Exon number

1

Exons

87898747..87900859

Genome context

Sequence
000001 CTTTGAAAAT AATTCGGATT TTAACTTCTA CTGTTCTCTC CTTCCTTTCA TTGCCCACTC TCAAGTACTA ATTAAATTTT 000080
000081 GTCTTTTCTA CCTTATAAAA TAAATATCTC ATCCATCTTT TCAATAGCCA CATCTTCTTC ACAACTCACC GGAACTGTTG 000160
000161 CAGCAGTTGC CTCCTGCCCA TCCCCTCCTC CAGCTTCCCT GCCAATCAGT TTGTAATCGA CAGTGGTGAT ACCCCTCATC 000240
000241 ATGGTGTTGT TCTCCAGTTG ATATTCTCAT CTGGGACCCA TCACTGGAGC CACAGCATTT TTAGAATTAA AGGCTGAACT 000320
000321 TTTTAGCATG ACAGTCACGA CCATCATAAC TGTCACTCAT TTGTCATTCA GTCTTATCTC TCACATCTAT GATTTTTACA 000400
000401 TTCCAGATAT CTTACAGTGG CCCCAGTATA CCTACCTTCC CCTTTATGCT GTGGCTCACA CAGGTGTCTC TAGCTAAAAA 000480
000481 AAAACACCTT CCTCTTGTTA ACATAGATAA CTCCTATGGG TCCTTTTCAC TCTATCAATA TCACCTCCTC CAGAATGTCT 000560
000561 GTTGAAACCA TGAGACTCAG GGAAACACTT TTTCTGCTCC CATAAAGTTC CATGATTACT CCAGATAGAA ATAGTTTACT 000640
000641 ATTGCATTGG AATGTCTTTT TCCTCCAAAG TGTATCCCTG GGTCCTAACA TAGTATTTGG ACATGTGGTA GGAACTCAAG 000720
000721 TAGTATTTGT TCAATAAAGT TTTTCAGTCA ACTATTGTAT CAATGCCTTA ATTCTAAGAC ATATCATTGA TCTAAACATT 000800
000801 TCTTCAATAA AAAATAGACT TCTGTTCATG ATTGAAAAAC TTCACAACTT TATAAACATT AATATATAAA AGTATAATTT 000880
000881 AGAATTGAGA AATATGGCAA CCACTTTTCT TAAGGAGACA TTCTATTTTT TTTCCAACCA TGAAAACTGG GAAATGTCCT 000960
000961 TAAATACCAT TCTTAAAAGC TGTGTTTTTG CATTTAACAG TCTCCATAAT TTGAAGTGAA ATGTCATTCA TTTGGATGTC 001040
001041 AAATGGCAAA ACTATATCTT TTTTAAAATT TAAGCGTATA TTATATAAAA TAATAACTTC GTGAAAGGTA ATTTTACAGA 001120
001121 ATTAAAACCC TGAGTACTCA TCAAAACCAT ATCAGTCATT TTATGGATGA GCAAGCTTGA TCTGGAAGGG AGGTGACATT 001200
001201 AGTTTCTCAG GCCCACAGAG CTTGTTAGTG GTAGAATTAG AACCAGAACA CAAGATTACC TGGCTTATTA CCAAGGAAGC 001280
001281 TTGAATAATT AAAAACGTAT TTTTTAATAC TAGGTGTTTG GGTGCTGTCT TCAGCATTGA GTTATAATGA TGATCAAATT 001360
001361 GGGAAGGCAC CCAGCCCTGT GGAAGTTCGT GCAGTGGAGA AGAGGAGATA ATGGCATAGC AGTGGAGACA CCCAAAGTCA 001440
001441 TCCACAGTTT GGCTTTAAAT AGCATTTCTA ATATCATTTT CTCCCTCCCT CCATGATGAG GTCTAAATTT CAACCATTTG 001520
001521 AACTCCTTGC TATTCCTGGT TCATTTCCAT GCTTATTGCC TCTGAGCCTT TGCTCCTGCT TGCCCTGCTG GTTCATGTCT 001600
001601 GCTGGTTCAT GTGTCCTTCC CTTTGGAAGC ACATCCAAAT CCTACCTGAT GTCTAAGACC TATCTGAAAA GGCAGCTCCT 001680
001681 CTACAGAGAC TTTCCTAGTT CTCTCTGTCA GTAGTAACTT CTTCCTCCCT TGAGTCCCAT ACAACTTTTC TTTCCCTTGT 001760
001761 TTGTAGCACT TCTCTAGTTA AGCTTTGTGT TACAGTTATT TTCTATCTAT CCAAATTTCC TTCATGATTT TTAGTAAATC 001840
001841 CTGCTGTGAG TTATTTGCTG CATAATTTAA TGAAATTACT GTAGAGTCAG CAAAGAAGTA GAGAAGAAAA AACACCAAGA 001920
001921 ATGAGGAGAA CCTAGCAAGG GCAGGCTTTT GGAAGCAAGA GGTAGATAAT TTAATAAAAG GATAGTTAAT AGTTTCAAAT 002000
002001 GTGTTATGAC TTTTTGCTCT GAGTCTCTAC TTTTTGTAGT TTGTGTTATT CTGATGTATT ATTTAACCTT TGTTCCTTAT 002080
002081 CACTTTTATT TAAATATAAC TTTCAATTTG TTTTCAAAAA AAAAAAAAAA AAAA
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Predicted Small Protein

Name NONHSAT023536_smProtein_1346:1495
Length 50
Molecular weight 5553.5538
Aromaticity 0.0816326530612
Instability index 40.6204081633
Isoelectric point 11.0000610352
Runs 9
Runs residual 0.0216216216216
Runs probability 0.0466643113703
Amino acid sequence MMIKLGRHPALWKFVQWRRGDNGIAVETPKVIHSLALNSISNIIFSLPP
Secondary structure LLLLLLLLHHHHHHHHHHHLLLLEEEELLHHHHHHHHLLLLHHHLLLLL
PRMN -
PiMo -