NONHSAT023759
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT023759 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1202 nt |
Genomic location |
chr11+:94818142..94820420 |
Exon number |
2 |
Exons |
94818142..94818352,94819430..94820420 |
Genome context |
|
Sequence |
000001 ATGTTTCAAC ATATCTCATA ATTAAGTATG ATTTTCCACC ATTCCCATTG TCTTTCCAGA GCTTCTCCGC CTAAATTATA 000080
000081 CTTCTCTGCA ACACAACACA CAGtacttcc cttatcagag catttctcat gctgtattgt aattgcttgt ctgtctgtcc 000160 000161 tccgtaccat acttcaagtt ctgtgatgcc aaggtctgtg tcagtcttgc aagtatgtca ggctgcatcc caaggtaaat 000240 000241 ggagagtgat taagtgctgt aagggtaggg tgacatcatc agatttatgt taggaagtca tcccagctgg agagtggatt 000320 000321 agaagggatg acgggataaa aactgggcat gacaaatgag gatggctTGG TCAAAGGTGT GATGGTAGAG ATGCAATTAT 000400 000401 CATCAGAGCA GTGAGGCAGG GGAAAGAAGT GTCTAGTTGG GCTCATATTT TTAAATAACT TTGGACAGAA CCAACCAAGC 000480 000481 CACAGAAGTG CATGTCAAAT GTTTTATTCC ACATCAACCA TTACTTTTCA TCCTCAAGCC TTTGCTGAAG GCTATGGAAC 000560 000561 CCAGCTTTGG CTGGGTCTGA GTGCAGAGAC CTAAGAGGAT CTGGTTTGAA ACCTCTTTCC CTGTGAGAAG AGAGTCAGTG 000640 000641 ACCAAATGTA GAGACAGCAG TGAATTATTG ATGGACCTAC ATGTTTTACA CATACAGATG CTGCTAAAGA CAGTTTTCCC 000720 000721 CTAAAATCAG CAGTTAGCAA ATGTTTTAAT TAGATCAAGG CATTCCTACC TTGTAGGTTG TTCCAGAATC TTGGGGTGAG 000800 000801 AACATTTGTA ATTTGCAAAA GTAATATTTT ATCTGTGGAA GGCAAGCACA TGGAAGAAAA ATCTATTGTC TTGTACTATA 000880 000881 AACTAAAGAA AATAAACAAA ATCATCCTGG CTGTGGGATG TACAAATGTT CAGTGTTATA TGTGTGTCAG TCACTGATAG 000960 000961 AGGGCTGGGG AAAAAACTAA AGTCTGCCAC AGGGACTGAG TGGCAGAGAT ATTTATGCTT ATCAGAGGTG GCGGGCAGGC 001040 001041 ATCAAGAAAT TTTGAGAAAG TGAATTAAAG TCTTATAAAT ACTTTAGTCA TAAAGGCCAA TGATGATTGT ATTATACTTT 001120 001121 CTGCATTTGT TAAAATACAA CATAATCATA TTTGGCATCT AATCACTCCA GATTTTGTGG TAGCCACTGG GATCCACCAA 001200 001201 CC |
Predicted Small Protein
Name | NONHSAT023759_smProtein_128:292 |
Length | 55 |
Molecular weight | 5911.9673 |
Aromaticity | 0.0555555555556 |
Instability index | 46.9703703704 |
Isoelectric point | 9.01055908203 |
Runs | 10 |
Runs residual | 0.0224932249322 |
Runs probability | 0.0382352941177 |
Amino acid sequence | MLYCNCLSVCPPYHTSSSVMPRSVSVLQVCQAASQGKWRVIKCCKGRVTSSDLC |
Secondary structure | LEEEEELLLLLLLLLLLLLLLLEEEHHHHHHHHLLLLEEEEEELLLEEELLLLL |
PRMN | - |
PiMo | - |