NONHSAT023968
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT023968 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
1008 nt |
Genomic location |
chr11-:105866350..105880475 |
Exon number |
3 |
Exons |
105866350..105866776,105866930..105867344,105880310..105880475 |
Genome context |
|
Sequence |
000001 CTTGGAAAAT GAACTTGGTC AAGGAGAAAA ATCCATGCTT CAACCACAGG ACATAGAAAC AGAGAAGTTA AAACTTGAGC 000080
000081 GAGAACGCTT GCAACTGGAA AAGGATAGGC TGCAGTTTTT GAAGTTTGAA TCTGAGAAGC TGCAGATTGA AAAGGAACGC 000160 000161 TTACAGTTCA CAGAACCCCA AAGTCCAAGC TCTTCTTGGG ATTTCCTACC TTCTGGAATC ACTCCTGGGA TTCTAGCTGT 000240 000241 TCTCCAGTGG ACCACCCTGT TTTTTCTAAA GGAACCCCAA TGGAGGCAGA AGTCTTACCA CACCCAATCA CTCACAGATC 000320 000321 TCAGCAGCCT CCTGCCTGAA GAAAGTAACA TGAAATCGGG AGTGAAAGCT AAGAGAGGTA CAGATGGGTT GCCTGACTAT 000400 000401 ACAACATATT CACCACATTG TTACCAACAA TAGGCCGGAA GTGGGAATTT TGCAATTTGC ACTTTCATGG CAGTGCTTCC 000480 000481 TAATAGGTGT TTATGAATAG ATTCCAAATG TGCTTCAGCC CTAGAAATGG CAATGAAAGT CTTCAAACTA GAAGATGCCT 000560 000561 TGTCAGGGAC ATGACGTAAA GTAGCTAGCT GCAGAGAATC TCACTGCCCA CTGTGGACAA GAAGCCTGAG AAGCTGCTGG 000640 000641 AGGAGATGCC CAAGGATCAC TGCACCCAGC CCAAGGTCTT GCCATGGTAT ATGTGGGTGG CAAATGGGAA TGGGAGAGGG 000720 000721 CAGCTCTACA AAGCATACCT CAGCAGCAGC AAAGAATCTC TGTCCTCATG TATCAGTCCT CTGAACCTTT GTGGTGCATG 000800 000801 TGCTTTTTAA TGGCATTCAT GCCAGCTTCA GAGTGACTGC TCCAATGCAG CATGTGTCTT CTCCAAAATA GAGTATCATT 000880 000881 ATTTTAAAAT ACTTGGTATG AAAAAATTTG ATGGGATTCA AATCCATTCA CATTTTGCCA AGGATTTTTA ATAGTACATT 000960 000961 CATCAACAAA AAGTAAGCTG TACTATATCC TTTAAATATA ATTTCAGC |
Predicted Small Protein
Name | NONHSAT023968_smProtein_683:835 |
Length | 51 |
Molecular weight | 5886.8646 |
Aromaticity | 0.14 |
Instability index | 89.794 |
Isoelectric point | 5.11480712891 |
Runs | 10 |
Runs residual | 0.0353216374269 |
Runs probability | 0.0404345521992 |
Amino acid sequence | MVYVGGKWEWERAALQSIPQQQQRISVLMYQSSEPLWCMCFLMAFMPASE |
Secondary structure | LEEELLLHHHHHHHHHHLHHHHHHEEEEEEELLLHHHHHHHHHHLLLLLL |
PRMN | - |
PiMo | - |