NONHSAT024010

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT024010

Source

NONCODE4.0

Same with

,

Classification

sense

Length

729 nt

Genomic location

chr11+:107992532..108002681

Exon number

3

Exons

107992532..107992653,107999370..107999928,108002634..108002681

Genome context

Sequence
000001 ACGCGACGGG TTCTGGTCCA AAAACCGCCT AAGTGCTCCG ATAACACCCA GGGACTCGCC TATTTTTACA GCGCGTTTCT 000080
000081 ACTTCCAAGG TCTCGGCGTA ATCATCTTAA TGAGCGTTAC TGgtgggggg aatcagatcc tgtttgtatg cttatggaat 000160
000161 tatccagaag taaaaggggt gaatgatgta gaggagaagg aagggataac tgtgccatct ttgaaaaggc aactggaaat 000240
000241 gggatccaga gtaaagtgga gagAACCAGG GAAGATTCCA TTAAACTGGA CCAGAAGCTT GAAAGAAGAG AAGTGGCTTA 000320
000321 GTAAACAAGG AACAAACTAG CTAAGTAGAA AGGGGACTTT TAAAATTTAA tttttatttc aataggcttt tgggaacagg 000400
000401 tggtgttgga ttatatgaat aagttcttta ttggtggtat ctgatatttt ggtgcaccca tcacctgagc agtatacact 000480
000481 gtaaaccaat gtgtagtctt ttattcctca cccccacccc ccgcctttcc cctgagtccc caaagtccac tgtatcattc 000560
000561 ttatgccttt gtgtcctcat agcgcagctc ccacttatga gtgagaacat aagctgtttg gtgtttccat tcctgagtta 000640
000641 cttcacttag aataatagtc tccaattcca tccaggttgc aGAAATAAGA TATGTGGAAC GGAGTTATGT ATCAAAACCC 000720
000721 ACTTTGAAG
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Predicted Small Protein

Name NONHSAT024010_smProtein_488:649
Length 54
Molecular weight 5900.0838
Aromaticity 0.11320754717
Instability index 74.9962264151
Isoelectric point 5.88800048828
Runs 9
Runs residual 0.00954901058444
Runs probability 0.0410312273058
Amino acid sequence MCSLLFLTPTPRLSPESPKSTVSFLCLCVLIAQLPLMSENISCLVFPFLSYFT
Secondary structure LEEEEELLLLLLLLLLLLLLHHHHHHHHHHHHLLLLLLLLLLEEELLLLLEEL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHHLLLLL
PiMo iiiiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTTTTTTooooo