NONHSAT024036

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT024036

Source

NONCODE4.0

Same with

,

Classification

sense

Length

1882 nt

Genomic location

chr11-:108384134..108408914

Exon number

4

Exons

108384134..108385602,108388962..108389100,108398863..108398911,108408690..108408914

Genome context

Sequence
000001 CACTGTCGCT GAGAAACAAG AGGCAGCAAG CAGCTGGTGG GTTGTGTGAT GAGGCTGCTG GATTTAACAG ACCACTGTCC 000080
000081 TCCCCTCTTG GGTGAATGGA GGGTTTTTCA CTTCCAGCTT TCACCCGAGG CTGTTTTTGT CTGATGAAAG AAAGAGCAGA 000160
000161 CCACAATGTA GATTTATGTG ACTGTAGCTA CCAGAGTCAC TAGCAAGGAA ATACTCTTCA AATAGATGTG ATGGCCATGC 000240
000241 AGGACCTCCT ATGCCTGTGA GGGGAGCTGC TGTGCAGGCA AAAATATACA ATTCACCTCT GGAAAATCAT CTAGTTGACA 000320
000321 GTACATTTGT CCCAAAGCCA GCAGTCATGA GGGAGGAGAG TGGCATGCCT CCACCGTGGG ATGCTTCACT GCTGGAGAAT 000400
000401 GAGTTTTTCC AAGTTTTAGA TGACTTGGAT AGCAAATTGG CTCAGGAACA GTCTGCAAGC TCAGTGAATA CCAGAACACC 000480
000481 CCTCAACTAT GGATCAAGAA CACAGTTCGG TCACTTTTAT TCCAGTGGTA ACAGACATGG TAATATCACA GAAAGGCACA 000560
000561 AAAAACACTA TAATGAAACT TCCAATATGT CTATCTATGA CATCCTAAGA CCAGGAACTC CTAGGGAAGG TTTTAAAACC 000640
000641 TTTTCTCCTA GGACAAGCAC AATTTATGAT ATGTATAGGA CAAGGGAGCC CAGAGTCTTT AAAGAAGATT ATGTGCAAAA 000720
000721 GAATACTTTT GGCAGTACTT CGCTGTGTTT TGACAGCAGG CAACGGTCGG CCTTACCAGC CACAGGGCAT TTCACAGCAA 000800
000801 GAAGCTTACA TTTTCCAGCC ACAACTCAGA GCAAGAGTGG GTTTATACCA CCAAGGCACC AGCAGAGTCC AAAGAGAACT 000880
000881 CCTTTATCAT CCATCATATG GAACAGATCA GATTCCTCTA GAGACAGGGA GAACCAGGAA GAGTTCCTGA GGGCACCATC 000960
000961 ACCAATGGAA ATTGATCCCG CTGACAAGTA TGTGTATCCC AGGGGTTTTC AGGAGAATAA GAGATATGAA TCGTACCATT 001040
001041 CACAGAATGT TTACCAACGT GTTAGTTTAA ATGCTCCCAT GGAGAATGCA ATGAGTCCCG ACACTTTTGA GAACTCAGAG 001120
001121 AACATGCCAT TCTACCATCA AAGCAACACA TTTACCAGAT CTTTCTTCAG CAATACCTTT GGACGAAGCG GAGAACAGAG 001200
001201 GAGATTTGGA CAAGGTCCTT TTTGGGGCCA AGAGAAAGGA CATTCTTTCT GGTCTGACTT TCATCGAAGC AGGAAATCAT 001280
001281 TCAGTTCTTC TGACAGAGAC TTTGAAATGA TTTCCATGGA AGCAAATAGT GTATCAGCCA TTCATGGCCA TAATGTTTCT 001360
001361 TCTGAACACT GGGAATCATT TTCTTCTGGT TATGGAACAG ATGTTTCCAG AGGCCAAGAA GAGCCACATC CTTGGCAGTT 001440
001441 TGATTTTCAG AGATCCACAC TGGATAGCAT GGTGGTATCA CATGGTAATG AGACCCAGTT GACTCCTCAT TTTGGCACAC 001520
001521 CAAATGTTTG CTCCATGACT GGTTCAAGCT ATCACGTCAA ATCTAGTGAG TTGGTAAGTC AACAGGACAG TTCTCCTGTA 001600
001601 GAAGTACATA TAAACAAAGA AGCTTCCTCA TTTGGAATTG CTCAGACTCT AGCATCCTCA TTCAAAACTT CCTTTTCCCA 001680
001681 GATTTCTGAT GACAGAAGGA ATCCTCAGAG TCCCAACTTG CAGAATCCCA CAGTCACTTT GCAGAAAATT TTTCCAAATA 001760
001761 AGCCTGCCTC TCATCCAATG AGAAGCCATA CAGAAGTCAC TGTGACCAGC AGCAATTCAG TTGACTCTCT GCCTCTTGCC 001840
001841 AAAAGCCAGC CCAATATCTT GGTCACAGAA GTAAATAATG AG
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Predicted Small Protein

Name NONHSAT024036_smProtein_665:949
Length 95
Molecular weight 10588.1812
Aromaticity 0.063829787234
Instability index 42.1021276596
Isoelectric point 9.94720458984
Runs 16
Runs residual 0.0413968547641
Runs probability 0.0125033121357
Amino acid sequence MICIGQGSPESLKKIMCKRILLAVLRCVLTAGNGRPYQPQGISQQEAYIFQPQLRARVGL
YHQGTSRVQRELLYHPSYGTDQIPLETGRTRKSS
Secondary structure LEEELLLLHHHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLHHHHEEELHHHHEEELE
EELLLLHHHHHHEELLLLLLLLLLLLLLLLLLLL
PRMN -
PiMo -