NONHSAT024159

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT024159

Source

NONCODE4.0

Same with

,

Classification

sense

Length

1374 nt

Genomic location

chr11-:111708262..111742270

Exon number

11

Exons

111708262..111708338,111708972..111709101,111711378..111711532,111715324..111715446,111724103..111724208,111724372..111724459,111728325..111728460,111731270..111731358,111739325..111739459,111740955..111741093,111742075..111742270

Genome context

Sequence
000001 AAAGCTATGT CTGCGCGCTC ACCGACTTCA TAGGGTGCCG AATTCTTTTT TCCCCAGGCT TGCCATGGCT AGTCGAGGGG 000080
000081 CTCGGCAGCG CCTGAAGGGC AGCGGGGCCA GCAGTGGGGA TACGCGCCCC GGCTGCGGAC AAGCTGCGGG AGCTGCTGGG 000160
000161 CAGCCGAGAG GCGGGCGGCG CGGAGCACCG GACCGAGTTA TCTGGGAACA AAGCAGGACA AGTCTGGGCA CCTGAAGGAT 000240
000241 CTACTGCTTT CAAGTGTCTG CTTTCAGCAA GGTTATGTGC TGCTCTCCTG AGCAACATCT CTGACTGTGA TGAAACATTC 000320
000321 AACTACTGGG AGCCAACACA CTACCTCATC TATGGGGAAG GGTTTCAGAC TTGGGAATAT TCCCCAGCAT ATGCCATTCG 000400
000401 CTCCTATGCT TACCTGTTGC TTCATGCCTG GCCAGCTGCA TTTCATGCAA GAATTCTACA AACTAATAAG GGCTGTGTGC 000480
000481 AAGAAGTTTG GGTTGCACGT GAGTCGAATG ATGCTAGCCT TCTTGGTTCT CAGCACTGGC ATGTTTTGCT CATCATCAGC 000560
000561 ATTCCTTCCT AGTAGCTTCT GTATGTACAC TACGTTGATA GCCATGACTG GATGGTATAT GGACAAGACT TCCATTGCTG 000640
000641 TGCTGGGAGT AGCAGCTGGG GCTATCTTAG GCTGGCCATT CAGTGCAGCT CTTGGTTTAC CCATTGCCTT TGATTTGCTG 000720
000721 GTCATGAAAC ACAGGTGGAA GAGTTTCTTT CATTGGTCGC TGATGGCCCT CATACTATTT CTGGTGCCTG TGGTGGTCAT 000800
000801 TGACAGCTAC TATTATGGGA AGTTGGTGAT TGCACCACTC AACATTGTTT TGTATAATGT CTTTACTCCT CATGGACCTG 000880
000881 ATCTTTATGG TACAGAACCC TGGTATTTCT ATTTAATTAA TGGATTTCTG AATTTCAATG TAGCCTTTGC TTTGGCTCTC 000960
000961 CTAGTCCTAC CACTGACTTC TCTTATGGAA TACCTGCTGC AGAGATTTCA TGTTCAGAAT TTAGGCCACC CGTATTGGCT 001040
001041 TACCTTGGCT CCAATGTATA TTTGGTTTAT AATTTTCTTC ATCCAGCCTC ACAAAGAGGA GAGATTTCTT TTCCCTGTGT 001120
001121 ATCCACTTAT ATGTCTCTGT GGCGCTGTGG CTCTCTCTGC ACTTCAGAAA TGTTACCACT TTGTGTTTCA ACGATATCGC 001200
001201 CTGGAGCACT ATACTGTGAC ATCGAATTGG CTGGCATTAG GAACTGTCTT CCTGTTTGGG CTCTTGTCAT TTTCTCGCTC 001280
001281 TGTGGCACTG TTCAGAGGAT ATCACGGGCC CCTTGATTTG TATCCAGAAT TTTACCGAAT TGCTACAGAC CCAACCATCC 001360
001361 ACACTGTCCC AGAA
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Predicted Small Protein

Name NONHSAT024159_smProtein_1130:1315
Length 62
Molecular weight 6616.8823
Aromaticity 0.0655737704918
Instability index 59.606557377
Isoelectric point 7.56451416016
Runs 10
Runs residual 0.0111173921236
Runs probability 0.0576929871047
Amino acid sequence MSLWRCGSLCTSEMLPLCVSTISPGALYCDIELAGIRNCLPVWALVIFSLCGTVQRISRA
P
Secondary structure LLLLLLLLLLLLLLLLLEEEELLLLEEEEEEELLLLLLLLLHHHEEEEELLLLEEEEEEL
L
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHLLLLLLLL
L
PiMo oooooooooooooooooooooooooooooooooTTTTTTTTTTTTTTTTTTTiiiiiiii
i