NONHSAT024159
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT024159 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
1374 nt |
Genomic location |
chr11-:111708262..111742270 |
Exon number |
11 |
Exons |
111708262..111708338,111708972..111709101,111711378..111711532,111715324..111715446,111724103..111724208,111724372..111724459,111728325..111728460,111731270..111731358,111739325..111739459,111740955..111741093,111742075..111742270 |
Genome context |
|
Sequence |
000001 AAAGCTATGT CTGCGCGCTC ACCGACTTCA TAGGGTGCCG AATTCTTTTT TCCCCAGGCT TGCCATGGCT AGTCGAGGGG 000080
000081 CTCGGCAGCG CCTGAAGGGC AGCGGGGCCA GCAGTGGGGA TACGCGCCCC GGCTGCGGAC AAGCTGCGGG AGCTGCTGGG 000160 000161 CAGCCGAGAG GCGGGCGGCG CGGAGCACCG GACCGAGTTA TCTGGGAACA AAGCAGGACA AGTCTGGGCA CCTGAAGGAT 000240 000241 CTACTGCTTT CAAGTGTCTG CTTTCAGCAA GGTTATGTGC TGCTCTCCTG AGCAACATCT CTGACTGTGA TGAAACATTC 000320 000321 AACTACTGGG AGCCAACACA CTACCTCATC TATGGGGAAG GGTTTCAGAC TTGGGAATAT TCCCCAGCAT ATGCCATTCG 000400 000401 CTCCTATGCT TACCTGTTGC TTCATGCCTG GCCAGCTGCA TTTCATGCAA GAATTCTACA AACTAATAAG GGCTGTGTGC 000480 000481 AAGAAGTTTG GGTTGCACGT GAGTCGAATG ATGCTAGCCT TCTTGGTTCT CAGCACTGGC ATGTTTTGCT CATCATCAGC 000560 000561 ATTCCTTCCT AGTAGCTTCT GTATGTACAC TACGTTGATA GCCATGACTG GATGGTATAT GGACAAGACT TCCATTGCTG 000640 000641 TGCTGGGAGT AGCAGCTGGG GCTATCTTAG GCTGGCCATT CAGTGCAGCT CTTGGTTTAC CCATTGCCTT TGATTTGCTG 000720 000721 GTCATGAAAC ACAGGTGGAA GAGTTTCTTT CATTGGTCGC TGATGGCCCT CATACTATTT CTGGTGCCTG TGGTGGTCAT 000800 000801 TGACAGCTAC TATTATGGGA AGTTGGTGAT TGCACCACTC AACATTGTTT TGTATAATGT CTTTACTCCT CATGGACCTG 000880 000881 ATCTTTATGG TACAGAACCC TGGTATTTCT ATTTAATTAA TGGATTTCTG AATTTCAATG TAGCCTTTGC TTTGGCTCTC 000960 000961 CTAGTCCTAC CACTGACTTC TCTTATGGAA TACCTGCTGC AGAGATTTCA TGTTCAGAAT TTAGGCCACC CGTATTGGCT 001040 001041 TACCTTGGCT CCAATGTATA TTTGGTTTAT AATTTTCTTC ATCCAGCCTC ACAAAGAGGA GAGATTTCTT TTCCCTGTGT 001120 001121 ATCCACTTAT ATGTCTCTGT GGCGCTGTGG CTCTCTCTGC ACTTCAGAAA TGTTACCACT TTGTGTTTCA ACGATATCGC 001200 001201 CTGGAGCACT ATACTGTGAC ATCGAATTGG CTGGCATTAG GAACTGTCTT CCTGTTTGGG CTCTTGTCAT TTTCTCGCTC 001280 001281 TGTGGCACTG TTCAGAGGAT ATCACGGGCC CCTTGATTTG TATCCAGAAT TTTACCGAAT TGCTACAGAC CCAACCATCC 001360 001361 ACACTGTCCC AGAA |
Predicted Small Protein
Name | NONHSAT024159_smProtein_1130:1315 |
Length | 62 |
Molecular weight | 6616.8823 |
Aromaticity | 0.0655737704918 |
Instability index | 59.606557377 |
Isoelectric point | 7.56451416016 |
Runs | 10 |
Runs residual | 0.0111173921236 |
Runs probability | 0.0576929871047 |
Amino acid sequence | MSLWRCGSLCTSEMLPLCVSTISPGALYCDIELAGIRNCLPVWALVIFSLCGTVQRISRA P |
Secondary structure | LLLLLLLLLLLLLLLLLEEEELLLLEEEEEEELLLLLLLLLHHHEEEEELLLLEEEEEEL L |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHLLLLLLLL L |
PiMo | oooooooooooooooooooooooooooooooooTTTTTTTTTTTTTTTTTTTiiiiiiii i |