NONHSAT024239
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT024239 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense |
Length |
713 nt |
Genomic location |
chr11-:113140254..113144623 |
Exon number |
3 |
Exons |
113140254..113140370,113140926..113141243,113144346..113144623 |
Genome context |
|
Sequence |
000001 CTCTCTGCCT TATCCCAGCC CCTTGGTTGA CGGTCGCCTC AGAGAAGCCC TGGATGAGGC TGAAGACACA TCTAACAAGG 000080
000081 AGGACACAGC ACAGCACAAA TGCACACCAC CACAGGACAC AACCCGATGA CAGCAGACAA AGAGAGGCCG TACTCGGTCT 000160 000161 TTGCTGGCGC AGGCGAAACA GAGCTGTCTG CAGTGGAAGG AGCAAGCTCA GGGGCTTGTC CACTGGCCCC AGCGGCGGGA 000240 000241 GCAGGAGAGC CCAGGGCTGC AAAAACATCC TTTGCAAGGG TTCCAAATGG AGAACGTGCA ATGAAAGGAA AGGCACCAGC 000320 000321 TGATGGCGCA GGGTGGTGCA GCTGCTGGGT CCCTGGGCTG GAGCAGAGCC CAAACCTCAG CAAGGTGGAC AGGTCTGCAC 000400 000401 TCACGAGAAG GCGGCCTTGC CCTCCTCCAT GTCCTTGCCC TTGGCCCCGG GCCCGGCTTT TCCACACAGG TTGACCGCAA 000480 000481 TGCACATGAA CAGGCCACAC TTGTTCAGGA AGTAGCAGGT GATGTCCACA ACCACCAGGA GCAGGACGAA GATGACGATG 000560 000561 AGGATGCCCA CGATGGCCCC GGTGCTCAGG CCTGAGGAAT GACCCCAAAG GAGCCCTGCA TTAGAGCACA CTGGGTTCAT 000640 000641 AGTTTACCCT CCTCACTGCA CCCCAGGAAG ACAAGTGAAG CCTGGGTGAC TCCAGAGACA TGGAGGCCTC CCC |
Predicted Small Protein
Name | NONHSAT024239_smProtein_53:322 |
Length | 90 |
Molecular weight | 10136.4305 |
Aromaticity | 0.0224719101124 |
Instability index | 55.5426966292 |
Isoelectric point | 11.7901000977 |
Runs | 15 |
Runs residual | 0.0253359770875 |
Runs probability | 0.0476182064418 |
Amino acid sequence | MRLKTHLTRRTQHSTNAHHHRTQPDDSRQREAVLGLCWRRRNRAVCSGRSKLRGLSTGPS GGSRRAQGCKNILCKGSKWRTCNERKGTS |
Secondary structure | LEEEEEEEELLLLLLLLLLLLLLLLLHHHHHHHHLLLEEELLEEEEELLLLEEELLLLLL LLLLLLLLLEEEEELLLEEEEELLLLLLL |
PRMN | - |
PiMo | - |