NONHSAT024308
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT024308 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
761 nt |
Genomic location |
chr11-:115389386..115394820 |
Exon number |
5 |
Exons |
115389386..115389777,115390261..115390331,115390856..115390935,115391976..115392062,115394690..115394820 |
Genome context |
|
Sequence |
000001 GCAGGTCAGG GTACAGTATC TGACTGCAAT CAATATGCAC TTAAATGTTT GGATCATCTA AACCTCCACT TAGCACAAAG 000080
000081 GATCTCCAGA GAGAACTTTC TTCAGAGCAG AGAAATTACT ATTCCAGAGC TCTGGAGGAG GAGCCTGAAG ATGGAGAGCA 000160 000161 AAGGACAGGA ATGAATGTGA GTCCTCTAGA GACAGTAACC CCAACCCATT TGGAACAGga actcaagaca cagaaaggcc 000240 000241 aagtaatttg tccaacttca tatgctagac tggaagaagg agcccagcct caagtcAGGA AAAGGAGGAA AGAGAACACC 000320 000321 TGACATTTGC CACTGAGGTG GAATAAAGGA ATCGTCTTCG TCTTTACAGt tttagaaatg aagaaatgaa tcttagagag 000400 000401 cttaaagtga gtcgtccaaa gaagcacaac tagtaattgg aagatcggtt atgtcaacta aggcctatct gacctcagag 000480 000481 tccactgcct cagacacaca atgtcataat gAATGCTACT CCATGGAGGA AATTATGTGG ATAAAGAGAA ATGATCTGGC 000560 000561 TAAGCATGTT TTGAACGGTt ataaattcat attcacatat gttgtgatat atgcacatac gtatatataa atgtagatat 000640 000641 acgagatata tatggatata tggatatata gataGACCCC CATTTAGCAC TGTCCCATGC AACCCAGATT AGTTCTAACA 000720 000721 TTATTTAGTT CTAAATCAAT TTCTTGATAC cagtggtttt t |
Predicted Small Protein
Name | NONHSAT024308_smProtein_44:322 |
Length | 93 |
Molecular weight | 10550.5891 |
Aromaticity | 0.0434782608696 |
Instability index | 65.4304347826 |
Isoelectric point | 5.87176513672 |
Runs | 11 |
Runs residual | 0.0156396621833 |
Runs probability | 0.0238714650479 |
Amino acid sequence | MFGSSKPPLSTKDLQRELSSEQRNYYSRALEEEPEDGEQRTGMNVSPLETVTPTHLEQEL KTQKGQVICPTSYARLEEGAQPQVRKRRKENT |
Secondary structure | LLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLLHHHHHH HHLLLEEEELLLHHHHHHLLLHHHHHHHHLLL |
PRMN | - |
PiMo | - |