NONHSAT024574
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT024574 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
1006 nt |
Genomic location |
chr11+:118951493..118952642 |
Exon number |
2 |
Exons |
118951493..118952024,118952169..118952642 |
Genome context |
|
Sequence |
000001 aggcctcagt gaaagggtca catctgagta cagacctgaa agTTAATTTA GTGGCAGTTG TGAAAATGGA GACAGAGGAA 000080
000081 ACAATCCCCA GGCTGAGTTG GCCTTGTTGG GAGCATGCTG AGACTCACTG CAGGTCCAGG GCTGTTGTAT TCATTTGACT 000160 000161 CCCTTAAGGC GATAAGAAGA GCAGGGCAGG GCCTTCAGGG GCCTTACCAG GGACCTTGCC CTGTGCACTT CAGCTGCCTT 000240 000241 CTTTCTCATC CTTGACTCCT GGCCTTGCCC TCACTTTTGC CACTCACTTC TGGTCTTTCT TCCCTGTAGT CCTAAGATTT 000320 000321 TCCAAAAGAC CAAGTGCAGC ATCTGTAACA GTGCCTTGGA GTTGCCCTCA GTCCACTTCC TGTGTGGCCA CTCCTTCCAC 000400 000401 CAACACTGCT TTGAGAGTTA CTCGGAAAGT GATGCTGACT GCCCCACCTG CCTCCCTGAA AACCGGAAGG TCATGGATAT 000480 000481 GATCCGGGCC CAGGAACAGA AACGAGATCT CCATGATCAA TTCCAGCATC AGCTCAAGTG CTCCAATGAC AGCTTTTCTG 000560 000561 TGATTGCTGA CTACTTTGGC AGAGGTGTTT TCAACAAATT GACTCTGCTG ACCGACCCTC CCACAGCCAG ACTGACCTCC 000640 000641 AGCCTGGAGG CTGGGCTGCA ACGCGACCTA CTCATGCACT CCAGGAGGGG CACTTAAGCA GCCTGGAGGA AGATGTGGGC 000720 000721 AACAGTGGAG GACCAAGAGA ACAGACACAA TGGGACCTGG GCGGGCGTTA CACAGAAGGC TGGCTGACAT GCCCAGGGCT 000800 000801 CCACTCTCAT CTAATGTCAC AGCCCTCAGA ACTAAAGCGG ACTTTCTTTC CCTGCCTTCT TATTTAGTCA GCTTGCCATC 000880 000881 CCTCCTCTTC ACTAGCAGTG TAGATCATTC CAGATCAGTG GGGGAGGGCA CCTCAGCAAC CTCTGAGTGT GGACAATAGC 000960 000961 TGCTTTCTTC TCTATCCAAG AGCACCAGGC TGTGCTTGGG TCCTTG |
Predicted Small Protein
Name | NONHSAT024574_smProtein_749:958 |
Length | 70 |
Molecular weight | 7302.2051 |
Aromaticity | 0.0434782608696 |
Instability index | 53.5652173913 |
Isoelectric point | 9.29595947266 |
Runs | 9 |
Runs residual | 0.0088965418281 |
Runs probability | 0.0255942216727 |
Amino acid sequence | MGPGRALHRRLADMPRAPLSSNVTALRTKADFLSLPSYLVSLPSLLFTSSVDHSRSVGEG TSATSECGQ |
Secondary structure | LLLHHHHHHHHHHLLLLLLLLLLHHHHLLHHHLLLLLLLLLLLLLEEEELLLLLLLLLLL LLLLLLLLL |
PRMN | - |
PiMo | - |