NONHSAT024681
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT024681 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
777 nt |
Genomic location |
chr11-:119545092..119546379 |
Exon number |
2 |
Exons |
119545092..119545357,119545869..119546379 |
Genome context |
|
Sequence |
000001 GTGAATGGAA agtagaaaga gcactttacc aggagtcccg agaattggct ggagctccca tgctgctgcc tgctagctgt 000080
000081 ggttccctgg ccttgaacct caggtttcat ctgttaaggg ggaccggcac ctacctagcc tgcctatatt cccatattat 000160 000161 gatcaaatat gaaaagctga ataatataaa actaccaagt gaaagagatt attattattA TTTTTCTTCC TTCAAAGACA 000240 000241 GACTCTACCA CACAAGCTCA GCAAAAGGCT AGGGGGCCTG GAGCCAAGTG GGTGACCCAG GAACAGCTTC TTGAGGCTGG 000320 000321 AGAGTCATAA CCCTACGCTG TGTCTCCCAC TTCCCACAGG CTAAATGGCT CTCTCCCCAA GGGTGTGGAG GCCCAGAACA 000400 000401 GAACCCTCTT CTTCAAGGGA CCCATCAACT ACAGCCTGGC AGGGACCTAC ATCTGTGAGG CCACCAACCC CATCGGTACA 000480 000481 CGCTCAGGCC AGGTGGAGGT CAATATCACA GCTTTCTGTC AACTTATCTA TCCGGGCAAA GGGAGGACAA GAGCTAGGAT 000560 000561 GTTCTGAGGA GAGACTTCAC CTGGGACGTG AAAGGAGCAT GGGCTTGATG TCAGACAGCT GTGACCCTGG ACAGGGCCCC 000640 000641 CCCCACcatc tgtaaaacgg ggacagtatg atgtaccttg aagggctgtt gtcagaattc tacgtgatgt aagtcaagca 000720 000721 cctagcacag atcagtctgt caataaatgg ccaatgttcc gtgattatta CCCTGAC |
Predicted Small Protein
Name | NONHSAT024681_smProtein_59:271 |
Length | 71 |
Molecular weight | 8145.3742 |
Aromaticity | 0.157142857143 |
Instability index | 51.6171428571 |
Isoelectric point | 9.39215087891 |
Runs | 10 |
Runs residual | 0.0019801980198 |
Runs probability | 0.0335188129306 |
Amino acid sequence | MLLPASCGSLALNLRFHLLRGTGTYLACLYSHIMIKYEKLNNIKLPSERDYYYYFSSFKD RLYHTSSAKG |
Secondary structure | LLLLLLHHHHHHHHHHHHHHLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLEEEEELLHHH HEEELLLLLL |
PRMN | - |
PiMo | - |