NONHSAT024681

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT024681

Source

NONCODE4.0

Same with

,

Classification

sense

Length

777 nt

Genomic location

chr11-:119545092..119546379

Exon number

2

Exons

119545092..119545357,119545869..119546379

Genome context

Sequence
000001 GTGAATGGAA agtagaaaga gcactttacc aggagtcccg agaattggct ggagctccca tgctgctgcc tgctagctgt 000080
000081 ggttccctgg ccttgaacct caggtttcat ctgttaaggg ggaccggcac ctacctagcc tgcctatatt cccatattat 000160
000161 gatcaaatat gaaaagctga ataatataaa actaccaagt gaaagagatt attattattA TTTTTCTTCC TTCAAAGACA 000240
000241 GACTCTACCA CACAAGCTCA GCAAAAGGCT AGGGGGCCTG GAGCCAAGTG GGTGACCCAG GAACAGCTTC TTGAGGCTGG 000320
000321 AGAGTCATAA CCCTACGCTG TGTCTCCCAC TTCCCACAGG CTAAATGGCT CTCTCCCCAA GGGTGTGGAG GCCCAGAACA 000400
000401 GAACCCTCTT CTTCAAGGGA CCCATCAACT ACAGCCTGGC AGGGACCTAC ATCTGTGAGG CCACCAACCC CATCGGTACA 000480
000481 CGCTCAGGCC AGGTGGAGGT CAATATCACA GCTTTCTGTC AACTTATCTA TCCGGGCAAA GGGAGGACAA GAGCTAGGAT 000560
000561 GTTCTGAGGA GAGACTTCAC CTGGGACGTG AAAGGAGCAT GGGCTTGATG TCAGACAGCT GTGACCCTGG ACAGGGCCCC 000640
000641 CCCCACcatc tgtaaaacgg ggacagtatg atgtaccttg aagggctgtt gtcagaattc tacgtgatgt aagtcaagca 000720
000721 cctagcacag atcagtctgt caataaatgg ccaatgttcc gtgattatta CCCTGAC
[back to top]

Predicted Small Protein

Name NONHSAT024681_smProtein_59:271
Length 71
Molecular weight 8145.3742
Aromaticity 0.157142857143
Instability index 51.6171428571
Isoelectric point 9.39215087891
Runs 10
Runs residual 0.0019801980198
Runs probability 0.0335188129306
Amino acid sequence MLLPASCGSLALNLRFHLLRGTGTYLACLYSHIMIKYEKLNNIKLPSERDYYYYFSSFKD
RLYHTSSAKG
Secondary structure LLLLLLHHHHHHHHHHHHHHLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLEEEEELLHHH
HEEELLLLLL
PRMN -
PiMo -