NONHSAT024718
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT024718 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
595 nt |
Genomic location |
chr11+:120039685..120053591 |
Exon number |
4 |
Exons |
120039685..120039856,120046724..120047017,120047026..120047091,120053528..120053591 |
Genome context |
|
Sequence |
000001 AAGCGCATCG AGGGAGCCCG CTCAAGCTGA AGCGCTGCAC GAGCTGTGTC TTCCTTCTCT CCGCCGCGAA TGCGGGCAGG 000080
000081 ATGCGAGCAA AAGACCCGGC AAAGAGGGCG CCGAGGGGGC GCAGCCGGGG CGCTGGGCGG ACCCAGAGGG GACATGGAGA 000160 000161 GGAACGCGGA AGATCCTTCT CTTTATTTAC GAAATGAAGA CATTAGATTA GATGTTAGAA ATTAGACACT GGATTAGATT 000240 000241 AGACATTTAG TTTAGACATT AGAAATTACT CTTGCTGGTT AGGGATTGGA AACTCTGAAA AGACTATACC ATGAGTTGTT 000320 000321 AAAGGAGAGG TCCACTGTCC TACTCATGTT TCAATAAATG ACGGATGGAT GGATGGATGG ATGAGTGGAG GAATATACAG 000400 000401 TATTTTGACC CCTGGAGTTC TAGGGGAAGA ATAAGACAAA CATATATCAT TAGTCCTGCC TGAGGCGGAC AAGATGACCT 000480 000481 ATTGGGTCTA TTTCCAACCC AGTATTAGTA TCTATAGCCA GAATGTGCAA TGAGAAGTAA TGAGGAAGGA GAAGAGGACG 000560 000561 ACACAGGAAA GATGAGGAGG AGGAGGAGGA GGAAG |
Predicted Small Protein
Name | NONHSAT024718_smProtein_80:196 |
Length | 39 |
Molecular weight | 4269.7781 |
Aromaticity | 0.0526315789474 |
Instability index | 43.3894736842 |
Isoelectric point | 12.1015014648 |
Runs | 5 |
Runs residual | 0.0410318559557 |
Runs probability | 0.0341812400637 |
Amino acid sequence | MRAKDPAKRAPRGRSRGAGRTQRGHGEERGRSFSLFTK |
Secondary structure | LLLLLHHHLLLLLLLLLLLLLLLLLLLLLLLEEEEEEL |
PRMN | - |
PiMo | - |