NONHSAT024973
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT024973 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
1079 nt |
Genomic location |
chr11+:125616189..125617941 |
Exon number |
2 |
Exons |
125616189..125616591,125617266..125617941 |
Genome context |
|
Sequence |
000001 ctctttccaa aatggacaag tccctcttgc tggaactccc catcctgctc tgctgcttta ggGGTGAGTC CCTAGGGTTG 000080
000081 ACAGCTGGTA AGAGTCCTGA ATTTAGGAAC AGGTGAGAGC ACCCATGACA GAGGCCTTCT CATGGGAGTC CTATGGCAAC 000160 000161 TGAAGCATGA TGAGCTTCTG TTCTAATGTT ATGCCTTCTA CCAGGGGTAT GTCATGTCCC CAGGACCTTA ACTAAAGCTC 000240 000241 TTCTCCCTTC CTTTATGGGG GGAAATAGGT AGATTAGAGA GGAATTGAGT GGATGTTCAT AGAAGCTTTG AGATGGGGTT 000320 000321 TGGAAAATGA GGTCTGCAGA CAGTGTATCT CTTTTTTTTT CCAACAGCAT TATCTGGATC ACTTTCAATG AGAAATGATG 000400 000401 CAGTACAGTC AATGAAATAG TTGCTGTGAA AAACAATTTT CCTGGTAAGT ATGAAGAGGA CCTGTCTGAT CACCTCAGTC 000480 000481 TTGATAATGT TTCACTTTTC CTTATTCCTC CACCTTTCTT TCCCCTCCCA TTTTTCAGGC TAAAATTCCT GAGACCATAA 000560 000561 ACCTCAATCA CTCTCTTGGC TTAGTGTATT TCCACAGAGG AAGAGGTTCA CGCTTGATGG GCTCTGGCAA AGCCCTGTGG 000640 000641 CTCTAGGCAG ACTTCTAACC CAAAAGGGGA GAGGGGTTCT TTCCTGGTAG TGCCATCTTT TCTCACTTCT CTTTCCCCTC 000720 000721 TCTCTGGCCA AGTGATAGAA ATTGTTCAGT GTAGGATGTG CCACCTCCAG TTCCCAGGAG AAAAGTGCTC CAGAGGAAGA 000800 000801 GGAATATGCA CAGCAACAAC AGAAGAGGCC TGCATGGTTG GAAGGATGTT CAAAAGTAAG TTGTGGGTTG GGGAAAAGAA 000880 000881 GAACGGGCAG AGGACGTATA CAGGGACGTA TCAGCCACAG GGGAAAGGAG AGATCTTACT TTACTTTTAC TATAGGCAGT 000960 000961 CTCATACCTG GGATGGCTGA TTCCTTCATC CCCATCATAT GCCGTAATGA AAATTAGATG GAGGTGGTCA CTAAGGAGGG 001040 001041 TGGGGGCCTA CAGCTAAGGG ATTAGCATTT TGAGAAGCC |
Predicted Small Protein
Name | NONHSAT024973_smProtein_755:979 |
Length | 75 |
Molecular weight | 8546.695 |
Aromaticity | 0.135135135135 |
Instability index | 46.6217567568 |
Isoelectric point | 9.20806884766 |
Runs | 14 |
Runs residual | 0.046539222149 |
Runs probability | 0.0448242360007 |
Amino acid sequence | MCHLQFPGEKCSRGRGICTATTEEACMVGRMFKSKLWVGEKKNGQRTYTGTYQPQGKGEI LLYFYYRQSHTWDG |
Secondary structure | LEEELLLLLLLLLLLLEEELLLHHHHEELEEEEEEEEEEELLLLEEEEEEEEELLLLEEE EEEEEEELLLLLLL |
PRMN | - |
PiMo | - |