NONHSAT025135
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT025135 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
635 nt |
Genomic location |
chr11+:130562127..130564858 |
Exon number |
2 |
Exons |
130562127..130562232,130564330..130564858 |
Genome context |
|
Sequence |
000001 TTACTGTTTG AGTATTCACT GCCCTAACTA CATTCTTTTA CATACTCTTG CAAAGCTCTA GCACCTTTAA GGAAATACAT 000080
000081 GATCCTTCTT TTGCGCTAGG TTGACATCCT GGTAAAAATT CTTTTGTGAC ATACACGTAT TTTAGGTATA ATATTCAATC 000160 000161 ATATGGATAT ATTGAAGTTT AATAAATCCC CTAACATCAG ATATTTAAAA GTTTCCTACT TTTTATTATG AATTATGCTG 000240 000241 CAATGAATAT TTTTGCACAT ATGTATGTCT TTATGTATGT CTCCAATAAT TTCCTAAGGA TATATTTCTA CAAGTGGGAG 000320 000321 TGCTATGTCA AAGGGTGTGC ATATTAAGGT TTTTGCAATT GGCTGCCAAA TTGCTCTCTG GAAAGGCTCC ACTGGTCTGC 000400 000401 TTTTCCTTCC ATCAGCCACA GCCGGGAATG CCTGCTTCTC GCCATGGTCA CCAGCACTGC GTCCTTGCTT CCTTTGGAAT 000480 000481 CTTTACAGAT TTTAATTACC CCCAAAATCA TATCTTACTG AAGTTTTAGT TTTCACGTCT TTGCTTCCCA TCGAGGCTGA 000560 000561 GCTTTTAAAT AAATTTTTGG CAGTGCAAAT TTCTTTTGCT AGCTGCCTAT TTTGTCACCA TATTATTTTC AAATT |
Predicted Small Protein
Name | NONHSAT025135_smProtein_227:346 |
Length | 40 |
Molecular weight | 4866.7026 |
Aromaticity | 0.307692307692 |
Instability index | 54.8438461538 |
Isoelectric point | 8.66119384766 |
Runs | 6 |
Runs residual | 0.0148944193062 |
Runs probability | 0.0342401224755 |
Amino acid sequence | MNYAAMNIFAHMYVFMYVSNNFLRIYFYKWECYVKGCAY |
Secondary structure | LLHHHHHHHHHHHHHHHHHLHHHHHEEEEEEEEEELLLL |
PRMN | LLLLLLHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLL |
PiMo | ooooooTTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiii |