NONHSAT025360

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT025360

Source

NONCODE4.0

Same with

,

Classification

intronic(AS)

Length

2002 nt

Genomic location

chr12+:752514..754636

Exon number

2

Exons

752514..753003,753125..754636

Genome context

Sequence
000001 GGGAGGGTGG CGTTCCTGAG TCCGCGGAGG AAAGGGTCGC AGCTGCAGTC GCGCCAGCCC TCGGGCCTAC ATCCGCTCCG 000080
000081 CCGCGACGCG GCTCACAAAC TAGGGAGGGG AGAAGGGAAG AAAGACCCGA TTCGGGAACA CGGCTTTGTC CCTGGAACTG 000160
000161 TACCTCATGT CCCctcactt aatcctccca agacctgtgg ggcgtgtcgt cattttaggg ctggagatga ggaaaccgag 000240
000241 gctcggagag atgaagcgTT GTACGGCCAC CGAGCGGCTG CTTTGCAACG AAGCCAAAGC CAACGTTTTG TTCTTAGCGG 000320
000321 CGGTCGTTTG AGCCACGCCT CACCGCAACG AGTCTGCCAT CAGCCAAGAG GTCACATCTT TTCTGGAACT CGCTCCCCCC 000400
000401 TCACATCATG GGAGCAGTCA GTCTACTCTT CCAGTAGAAA CTGTTTTGCC ACTTTTGGGG GGAATCTTGA GCTACCAGct 000480
000481 catcgctcag atggagtgaa ggtacctgag cgcaggaacc atggtcttca ttgctgcctc agcaTTAGCG GAAGTGCCAC 000560
000561 GGGCCGGCTC CCAGGGGGCC AGAGTTTCCC AGGAACACCA TTGAGTACCA CTGAACTAGA GTCTGCAAGT TAAAGTAAGG 000640
000641 CAAGAAGGAA AACCGGAAAC AACTGTAAAA ACCTGACCTT TCGTCACCTT aatactggcc atcatttatc gagtgcttat 000720
000721 tatgtaacag acattgttct cagtgTGTGA GTGcagtgtt cctcaaacct aaatgtgggc ctgaatcgca gcggatcttg 000800
000801 gtaaaatgca gtttctcatt cagtacctct ggggtgcggc ctgagattct gcatttccaa caagctccca ggATactttg 000880
000881 tatagaaagg ctttggtgta ttaactaact cgatcttctt aataatccta tgaaatacta ctgctattcc cattttacag 000960
000961 atgaggaaac agaggttaag CATATATGAA CTTACATCAA AATAAATAGA CTGCAGGGCA AGGAGGGAGG GGAGAATAGT 001040
001041 GTGGGCAGTG TACAGTGCAG AAACAAAGTT CTAGGCAGAG GAAAAAGGAT TTACAGAAAG CCTGGCATAC AGGGCAGGGG 001120
001121 GACGGGGCCT GCACAcgggg ctgtttcacc gttagacgtt ataagcacag tacttggggc tatgggcttc ctgaaggtcc 001200
001201 caagtatttg agacctgaaa aaaatttatt gacacctaca taggaaaagt gaacttttaa attaataatt ccaaaattca 001280
001281 aatcacgaat tgtttcaaaa attttacatg atagaattca tatttagtaa gcgatacggg tatattttaa tgcatttgat 001360
001361 tttaaaaacg gggtagggcc tACTAAGAAC AGGCCAAGCC CTGGCCCCAG TGGGTTTGGA TATAATCCTG AGGGCAGCTG 001440
001441 GGAACCACTG AGAGAAGCAG Gagaatgttc tctgtggcta cagtgaggag aatggattgg agggaggcca gactggaggc 001520
001521 ccagtggcta gagaccagat aggcagttac agtcttccag actgcgagac aatCTCTCTT TAGTGCCAAG ATTAGCATAA 001600
001601 AATCATAGCA TTATATAACC CAATTATTCT TTGATTCCTG CATCCCCAAT CTGACTCAGC ATTCTAAATT TACTTAAGAT 001680
001681 CTGGGGACAA GGGTTTTTGG CAAATCCTTG AAGGCAAATG ATGTTACAGT CAATCagtat atgccttgag ccagacagac 001760
001761 atgggtacgg gcctcagttc tgctgcttgc tagctatgtg actttgcaca agtgatttaa cttctctggg ccttggattc 001840
001841 cttactggta acacgagcat aatcgattcc tcacagaatt aagtgagaaa actatgtatg taggacttct tatggagtgg 001920
001921 gtacttagaa ataaatggta gccgttatca ttTATGTGCC TTTGTTCTGA AATCTGCTTA AGTTTTCTCT AGGAAGTAAC 002000
002001 AG
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Predicted Small Protein

Name NONHSAT025360_smProtein_1307:1375
Length 23
Molecular weight 2674.2719
Aromaticity 0.181818181818
Instability index 69.0181818182
Isoelectric point 9.52288818359
Runs 5
Runs residual 0.00909090909091
Runs probability 0.0332803391628
Amino acid sequence MIEFIFSKRYGYILMHLILKTG
Secondary structure LEEEEELLHHHHHHHHHHHHLL
PRMN -
PiMo -