NONHSAT025963
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT025963 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
855 nt |
Genomic location |
chr12+:4714063..4723039 |
Exon number |
4 |
Exons |
4714063..4714252,4719321..4719450,4721709..4721884,4722681..4723039 |
Genome context |
|
Sequence |
000001 TTACTTTGCC TCCGCAGTAT ACACGTACAT CCAAAGCCGG TTCTACCGAT CCCCAGAAGT GATCCTGGGC CACCCCTACG 000080
000081 ACGTGGCCAT TGACATGTGG AGCCTGGGCT GCATCACGGC GGAGTTGTAC ACGGGCTACC CCCTGTTCCC CGGGGAGAAT 000160 000161 GAGGTGGAGC AGCTGGCCTG CATCATGGAG ATTCCAAAGG TTTTCCTAAA AATATAACCA ACAACAGGGG GAAAAAAAGA 000240 000241 TACCCAGATT CCAAGGACCT CACGATGGTG CTGAAAACCT ATGACACCAG CTTCCTGGAC TTTCTCAGAA GGTGTTTGGT 000320 000321 ATGGGAACCT TCTCTTCGCA TGACCCCGGA CCAGGCCCTC AAGCATGCTT GGATTCATCA GTCTCGGAAC CTCAAGCCAC 000400 000401 AGCCCAGGCC CCAGACCCTG AGGAAATCCA ATTCCTTTTT CCCCTCTGAG ACAAGGAAGG ACAAGGTTCA AGGCTGTCAT 000480 000481 CACTCGAGCA GAAAAGATGA GATCACCAAA GAGACTACAG AGAAAACAAA AGATAGCCCC ACGAAGCATG TTCAGCATTC 000560 000561 AGGTGATCAG CAGGACTGTC TCCAGCACGG AGCTGACACT GTTCAGCTGC CTCAACTGGT AGACGCTCCC AAGAAGTCAG 000640 000641 AGGCAGCTGT CGGGGCGGAG GTGTCCATGA CCTCCCCAGG ACAGAGCAAA AACTTCTCCC TCAAGAACAC AAACGTTTTA 000720 000721 CCCCCTATTG TATGACCTTT GCTGAGGGTA TGTCCTGCTC CTTTCCACCA GTGATTTGTA TTAAGACAGC ACTTATATTG 000800 000801 TACAATACTT CAGACTGTTT TTTTTAAATA CATAAAACTT TATGTTAAAA AACTC |
Predicted Small Protein
Name | NONHSAT025963_smProtein_320:448 |
Length | 43 |
Molecular weight | 4400.7635 |
Aromaticity | 0.0714285714286 |
Instability index | 79.8928571429 |
Isoelectric point | 3.71002197266 |
Runs | 8 |
Runs residual | 0.0143158529234 |
Runs probability | 0.0201377848437 |
Amino acid sequence | MGTFSSHDPGPGPQACLDSSVSEPQATAQAPDPEEIQFLFPL |
Secondary structure | LLLLLLLLLLLLLLLEELLLLLLHHHLLLLLLHHHHEEELLL |
PRMN | - |
PiMo | - |