NONHSAT025973
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Contents
[hide]Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT025973 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1329 nt |
Genomic location |
chr12-:4809583..4829268 |
Exon number |
4 |
Exons |
4809583..4810345,4812479..4812606,4813344..4813463,4829031..4829268 |
Genome context |
|
Sequence |
000001 TGCCTTTTAA ACGCTTGTTC TGTCTCTTTC TAACTCCTTT GTCTCCGCCG GACTCGGGGT ATCTCCTGGG TGGTGTGGGG 000080
000081 CTGGTTTCCC CAACAGCTTT CTCTCCACCC AGCTTCATAG ATGACACCCT GCCTGCTAGG CCAGATGTTC TCCGGCCAAG 000160 000161 AACACTATTA TAGCTGCCTG GCTTCTCCCT GAGCAGCGTC AGGTGTGAGG AGTGCGCATG GCAGCTGCCC AGTGACAGAT 000240 000241 GGAATCTCCC TCTCTCACCC AGGCTGGAGT GCAATGGCAC AATCAGCTCA CTGCAACCTC CACCTCCCGG GTTCAAGTGA 000320 000321 TTCTTCTGCC TCAGCCTCCC GAGTAGCTGG GACTACAGCC TTCATTTCAG TCAACAACCA CATAACAGAT CATCAAAATA 000400 000401 CATAAAGCAA AAACTGACAG AACTAAAGTT AAATATACAT ATCTACAATT ATGGAGAGAA TAACAAACAA AAAAATAGAA 000480 000481 CAAAAATGTT CCACGCCTTG GTCAATGGTA CCACCAGCCA GCGAGGTTCC CAAGCCAAGA ACTTCGGAAG CATCCGTGAT 000560 000561 TCTTCATCTT CCACATCCAC TTTATCACCG GAAGCACGCA TTCAACTTTC TAAACATCCC TCAGACTGAC CCACATCTTT 000640 000641 CTATCCACTT TTCACATCTT GCTTGAATGA CTTCCCCAGG CCCAGCCAGT CTCCCGCCTC CAGCTCCGCC CCCTTCTGAC 000720 000721 TCCCTTTATG TGGTACAATC AGAGAGCCCT TCCCAAAGCA CAAATCTGCT TTCACTGCTT TGCTTCAAGC CCTTTCGTGG 000800 000801 CTCCTATTTC CAGCTGGATG AGGTCCAAGC CTCTTAACGT GCTGTACGTG TACATGCCTG ACCCCCGCTA CTTGACCAGC 000880 000881 CAAGTTTCTT CATAGCGCTG TGTCTTTGTT CCTCCTGCCT AGAATGTCCT TCCCCTTTTC TCTCGCTTCA TGGTGTGCCA 000960 000961 AACTCCTATC CTGTGAGATC CAGCTTACAC GTCAGCTTCC CCGTGATGCT TTTCCTAACT CCCTATTCAG CCAGTGAAGT 001040 001041 GCTCCCTGCG TTCCCATGTG GCTTATATCT CTGTAAAAGC TCCACAGAGC TGTTTTAATT TATCCGTTAA TGTACATGTC 001120 001121 TTCCCCACTA GACTTTTGCT CCTTAAAGTA TCTCCTTCAT CTCTGCTTTG CATAACCTAA CAGAGTTCAA CACATAGGAG 001200 001201 TGTCTTAATA AATGCTGAAT AAAATAATTA ATAAACAAAT GAAACAATAA AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA 001280 001281 AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA AAAAAAAAA |
Predicted Small Protein
Name | NONHSAT025973_smProtein_485:628 |
Length | 48 |
Molecular weight | 5020.4237 |
Aromaticity | 0.0425531914894 |
Instability index | 40.8978723404 |
Isoelectric point | 9.97662353516 |
Runs | 8 |
Runs residual | 0.00393617021277 |
Runs probability | 0.0365549372903 |
Amino acid sequence | MFHALVNGTTSQRGSQAKNFGSIRDSSSSTSTLSPEARIQLSKHPSD |
Secondary structure | LEEEEELLLLLLLLLLLLLLEEEELLLLLLLLLLHHHEEEELLLLLL |
PRMN | - |
PiMo | - |