NONHSAT026009
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT026009 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
480 nt |
Genomic location |
chr12+:5620775..5622242 |
Exon number |
3 |
Exons |
5620775..5620890,5621283..5621374,5621971..5622242 |
Genome context |
|
Sequence |
000001 cagtaaggac aaaattaaat gaaatgtgca aaataactgc acaaactctg tgctgggtgc ctggtgacgc ggaaccgtcg 000080
000081 gctggcacgc tgcgccccca cgtggaagct tgcaagGACT GTGTTCTGGA CAAGGACCTC CTGAGGCACC CATGCTGCAG 000160 000161 TTCCCAGAGG CTTAAGGACG GCTGCGGGAC GTGTGGGCGT CTGGGTTGgg tcacctctcc aaggatgcct tctctgacca 000240 000241 cccagcgtag ttccccaggc actccgtcac tgtcctgctg taaccccttc ctggcgatcc tcttcgcctg atatttttgt 000320 000321 gctcactgat ggatgagctc tgctcatgaa aatgcaaagt cccttaagag cagagtccgt gtctgttctt ttggctgcac 000400 000401 tgttacctgc acagagaaga gtgcccaacc gagattgtgc attcaatacg tatattttat tagttgaaat aaatgaatGA 000480 |
Predicted Small Protein
Name | NONHSAT026009_smProtein_23:310 |
Length | 96 |
Molecular weight | 10194.8039 |
Aromaticity | 0.0421052631579 |
Instability index | 56.8031578947 |
Isoelectric point | 8.38470458984 |
Runs | 9 |
Runs residual | 0.0343141317862 |
Runs probability | 0.0393040098923 |
Amino acid sequence | MCKITAQTLCWVPGDAEPSAGTLRPHVEACKDCVLDKDLLRHPCCSSQRLKDGCGTCGRL GWVTSPRMPSLTTQRSSPGTPSLSCCNPFLAILFA |
Secondary structure | LEEEEEEEEEEELLLLLLLLLLLLHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLLLLLLL LEEELLLLLLLLLLLLLLLLLLLLLLLLLEEEEEL |
PRMN | - |
PiMo | - |