NONHSAT026052
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT026052 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
561 nt |
Genomic location |
chr12-:6464558..6465459 |
Exon number |
2 |
Exons |
6464558..6464601,6464943..6465459 |
Genome context |
|
Sequence |
000001 gatgcatggg cagttaggga catgcaagaa tctttgtaat gcaacaagag agaagttaca aggcagcacg gaagTCAATG 000080
000081 CCGGTGAACC CAGATGGCCT GGTGAGAGGA GCCTGGACTA GAAGGtagat gtgtgacctt gggccagctg tttgagctct 000160 000161 ctgagcctta gcttcctcct ctgtgatatg aggatgagac tctcacaggc tgttggttgg agtgactgag ggagtgtgag 000240 000241 taaagctctc agcattgtgc cagcacatag taggtgatca ggaaacaaat ggctctGAAA GGCACAAGTC CTGTAGGAGT 000320 000321 TTAAGAGAGT GGACATTTCT CTCTGCCTCA TCTCCCTATT CCCTGCACCA CCTACACTTT CCTCTCTGAC CCTACTCTCT 000400 000401 CTTTCCTGAT AAGGAATTAC TCTCACTTCC ACCACCCGAT GTATGGAAAC TGCTATACTT TCAATGACAA GAACAACTCC 000480 000481 AACCTCTGGA TGTCTTCCAT GCCTGGAATC AACAACGGTC TGTCCCTGAT GCTGCGCGCA GAGCAGAATG ACTTCATTCC 000560 000561 C |
Predicted Small Protein
Name | NONHSAT026052_smProtein_38:127 |
Length | 30 |
Molecular weight | 3389.8707 |
Aromaticity | 0.0689655172414 |
Instability index | 62.4034482759 |
Isoelectric point | 11.4515991211 |
Runs | 5 |
Runs residual | 0.0271551724138 |
Runs probability | 0.0269033739622 |
Amino acid sequence | MQQERSYKAARKSMPVNPDGLVRGAWTRR |
Secondary structure | LLHHHHHHHHHHLLLLLLLLLLLLLEELL |
PRMN | - |
PiMo | - |