NONHSAT026068
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT026068 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1064 nt |
Genomic location |
chr12-:6548167..6560683 |
Exon number |
5 |
Exons |
6548167..6548842,6556127..6556253,6557203..6557316,6557806..6557903,6560635..6560683 |
Genome context |
|
Sequence |
000001 ACAGGAAAGG GCCCTGACAA GAGGATGGGA CTGCAGTTGT GGCTGCCAGg ttggagtgca gtggcacgat ctcggctcag 000080
000081 tgcaacctcc gcctcctgag ttcaagtgat tctcctgcct cagcctccct agtagctggg attacagGAC AAGGAGAGGG 000160 000161 ACAAATTCCT TCTTGGCATC CTTATGGCCC TGTGACCTGC TAATGAATGC TGACTCTGAG TTGCTACTAG AATTTGGTTT 000240 000241 CCTTGTGGCT TCCCAGGAAT Tggtctcact ctgctcactc tgtctcccaa gctggagtgc agtggtacag tcacggctca 000320 000321 ctgcagcctc cacttcctgg actcaagtga tcttctcact tcagccttct gagtagctgg gactacaggt agacccagtg 000400 000401 taatcacaag catccttgta agtggcaaag aggcagagga gacagcgcca gagaggcagc tgcatgagaa ggatcaagat 000480 000481 gttgctgact ttgaagttgg aagaagaagg ccatgagcct cagtatgtgg gcggcttcta gaagctggaa ggggcaagga 000560 000561 gatggatttg acccttcagc ctccaggggc agctgtacct gccatcactg attgtagcct ggtgaggcct gttttagact 000640 000641 tctgacctgt agagctgtaa cataatacat ttgggttgtt ttcaaccact aagtttgtgg taatttgttg tagcagctgt 000720 000721 agaaaatgaa tacatatgaa tcctctggca tttgtttgag atttgctcta tggcctagta tgtggttgta aatgttccat 000800 000801 ctgtgcctga aaaaatgtat attTCTAATT CAGTAGTCTC TGCTTTTTTT TTTTATTTTG TACCCCATCA ATAAAATGAT 000880 000881 TTTCAGCATG TATCCCCAAA TAAACAATAT TTTATTTATT GATTGATTGA TAAACAGACA TGTTTAATGA TAGCTTGCTT 000960 000961 TTCACAGAGG TGACTTCGGA GACTTCTAAT CTATAATCCA GGAGTATATA ACCATGCAGC ACAGACCAAT TAGTCACATG 001040 001041 TAAAATAAAC TAGATTCTTA CCAC |
Predicted Small Protein
Name | NONHSAT026068_smProtein_512:610 |
Length | 33 |
Molecular weight | 3441.7697 |
Aromaticity | 0.09375 |
Instability index | 79.621875 |
Isoelectric point | 7.86859130859 |
Runs | 5 |
Runs residual | 0.0353954081633 |
Runs probability | 0.0231937820173 |
Amino acid sequence | MSLSMWAASRSWKGQGDGFDPSASRGSCTCHH |
Secondary structure | LLLLHHHHHHHHLLLLLLLLLLLLLLLEELLL |
PRMN | - |
PiMo | - |