NONHSAT026073
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT026073 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
2034 nt |
Genomic location |
chr12-:6548345..6557662 |
Exon number |
2 |
Exons |
6548345..6548842,6556127..6557662 |
Genome context |
|
Sequence |
000001 TTTGCCTTTA AAATATACAT TTTGCTCAAG TGTAGAGGTC CGATGCTGGG TGGCTGGGTG TTAATTATCC TGGGGGCGGG 000080
000081 TGTGGTAGGG CACTAGCTGG GCTGGGCTGG GCTCGCTGGC GGCTGGTTTG AGAGGAGGGT GATTCAGAGG AAGGCAGTGA 000160 000161 CACCCAGATG TGGGACAGGC TGCAAGAAAG CCTGGTGGGC CTTAGGGCAG ACACTTGTGG GGACCCGGGG AGCCCTAGGT 000240 000241 GCCCTGACAG GTGGAAGAGG GGTGCAGAAA GGGAGGATGT CAAAGAGAGA ATGTCAAAGG TCATAACCAA ACCTAACAAT 000320 000321 TTTCTTCTAC TTATGCCTTT TGTCAGGACA AGGAGAGGGA CAAATTCCTT CTTGGCATCC TTATGGCCCT GTGACCTGCT 000400 000401 AATGAATGCT GACTCTGAGT TGCTACTAGA ATTTGGTTTC CTTGTGGCTT CCCAGGAATT GTGAGCCATG TTGGATAAGG 000480 000481 ACCTGCAAGG GAAGAATGAG GAAGCCTGGG ACAGTGCAGG AGGGGAGAGC ACTGGTGGTA GAGAGGAGTG ATGACAAGGG 000560 000561 TCTCCGCCAA AAGGGAAATG GAGGGGTTAA AGAAGCTGCT GGGGAGGGTT AAAAACAATG tgttctcact cgtaggtggg 000640 000641 aattgaacaa tgagaacact tggacacagg aaggggaaca tcacacactg gggcctgtcg tggggtgtgg ggagggagga 000720 000721 gggatagcat taggagatat acctaatgta aatgatgagt taatgggtgc agcacaccaa catggcacat gtatacctat 000800 000801 gtaacaaacc tgcacattgt gtacatgtac cctagaactt aaagtataat TAAaaaacaa aacaaaacaa aacaaaaACA 000880 000881 ATGAGGTGCT ATTGTTTTAG TGGTGAGTAT CCGGAGACCT GGGAGTTCTA TTTACCAGGT ATAACCTGGG CTCAAAATTC 000960 000961 CAGGCTGACT TCAGGCATGT cctcatctca tagatgccag cactaaggcc cagagaggGC CGAGCTCATT CAGCCCACCC 001040 001041 ATCTTCTCAC CCCTGACTGC ATTTCCCGGG GGTCCTTCTG CAGCCAGGTG CTGCTGTGGT ACTTTGGGAT CTATTGGCTG 001120 001121 AGCTCCCAGA GAAGGGTCAT GGATTGGGCT AGTTTGGAAC AAGTGAAGGG ACTGAAGATG GGCTCAGTAT GGGGCGAAGA 001200 001201 CCTTCAGGAA GGGTCTGCAG AGTGAGTAGG GGGGTTTTGA CTAGGAAAAG TTCCAACCCT GCCGGGGCCG CTGTCAAGAG 001280 001281 AAAAGCATCT ATTACAGTTA CATTTTTAAG TTAAGTAGAC TGAAGAATAT TTCTTGTGTA TTAAAGACGT TCCTTTTTGG 001360 001361 TTGATTTGCA ATGGAAAAGC ttttgttttc tttttttttt tggaaacagg gtctcactct gctcactctg tctcccaagc 001440 001441 tggagtgcag tggtacagtc acggctcact gcagcctcca cttcctggac tcaagtgatc ttctcacttc agccttctga 001520 001521 gtagctggga ctacaggtag acccagtgta atcacaagca tccttgtaag tggcaaagag gcagaggaga cagcgccaga 001600 001601 gaggcagctg catgagaagg atcaagatgt tgctgacttt gaagttggaa gaagaaggcc atgagcctca gtatgtgggc 001680 001681 ggcttctaga agctggaagg ggcaaggaga tggatttgac ccttcagcct ccaggggcag ctgtacctgc catcactgat 001760 001761 tgtagcctgg tgaggcctgt tttagacttc tgacctgtag agctgtaaca taatacattt gggttgtttt caaccactaa 001840 001841 gtttgtggta atttgttgta gcagctgtag aaaatgaata catatgaatc ctctggcatt tgtttgagat ttgctctatg 001920 001921 gcctagtatg tggttgtaaa tgttccatct gtgcctgaaa aaatgtatat tTCTAATTCA GTAGTCTCTG CTTTTTTTTT 002000 002001 TTATTTTGTA CCCCATCAAT AAAATGATTT TCAG |
Predicted Small Protein
Name | NONHSAT026073_smProtein_167:463 |
Length | 99 |
Molecular weight | 11243.8733 |
Aromaticity | 0.0816326530612 |
Instability index | 49.2846938776 |
Isoelectric point | 6.24700927734 |
Runs | 18 |
Runs residual | 0.0446309364867 |
Runs probability | 0.044186343206 |
Amino acid sequence | MWDRLQESLVGLRADTCGDPGSPRCPDRWKRGAEREDVKERMSKVITKPNNFLLLMPFVR TRRGTNSFLASLWPCDLLMNADSELLLEFGFLVASQEL |
Secondary structure | LHHHHHHHHHLLLLLLLLLLLLLLLLHHHHLLLHHHHHHHHHHHHEELLLLEEEELLLEE LLLLLHHHHHLLLLLLLLLLLLHHHHHHLLEEEEEEEL |
PRMN | - |
PiMo | - |