NONHSAT026346
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT026346 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
587 nt |
Genomic location |
chr12-:8691550..8693497 |
Exon number |
3 |
Exons |
8691550..8691902,8692451..8692543,8693357..8693497 |
Genome context |
|
Sequence |
000001 ATTCTCCCTG AATCTTACCA ACAAAACACT CCTGAGgaga aagaaagaga gggagggaga gaaaaagaga gagagagaAA 000080
000081 CAAAAAACCA AAGAGAGAGA AAAAATGAAT TCATCTAAAT CATCTGAAAC ACAATGCACA GAGAGAGGAT GCTTCTCTTC 000160 000161 CCAAATGTTC TTATGGACTG TTGCTGGGAT CCCCATCCTA TTTCTCAGTG CCTGTTTCAT CACCAGATGT GTTGTGACAT 000240 000241 TTCGCATCTT TCAAACCTGT GATGAGAAAA AGTTTCAGCT ACCTGAGAAT TTCACAGAGC TCTCCTGCTA CAATTATGGA 000320 000321 TCAGGTATAA TAGTCCCAAA GGTGAACATC AAAATTTACA AAGCAACATT TTCTGGCTTC TAGATTGACT TTGGGACAGG 000400 000401 TGAGATATAG CTGGATTAGG TCTTATTTTT CAAAAGCAAA ATGTAAAATC CTAGAAATTT GGTGATGCAA TTAGCATTGG 000480 000481 GGCAGAAAGT CTTGGGGACA TTATAGTAAA CTTTTAGAAT AAATTTGAGG GGTATGTCTG AACAGTAAAT CTGGAAGTGG 000560 000561 AAGGTATTAT TCCCAGGAGT GTACCTT |
Predicted Small Protein
Name | NONHSAT026346_smProtein_104:382 |
Length | 93 |
Molecular weight | 10450.0515 |
Aromaticity | 0.152173913043 |
Instability index | 42.3597826087 |
Isoelectric point | 8.59185791016 |
Runs | 12 |
Runs residual | 0.00477009696591 |
Runs probability | 0.0238988988989 |
Amino acid sequence | MNSSKSSETQCTERGCFSSQMFLWTVAGIPILFLSACFITRCVVTFRIFQTCDEKKFQLP ENFTELSCYNYGSGIIVPKVNIKIYKATFSGF |
Secondary structure | LLLLLLLLLLLLLLLLEEHHHLHHHHLLLEEEEEEEEEEEEEEEEEEEEEELLLLLLLLL LLLEEEEEELLLLLEEEEEEEEEEEEEEELLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLL LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL |
PiMo | ooooooooooooooooooooooooTTTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiiii iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii |