NONHSAT026367
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Contents
[hide]Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT026367 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1108 nt |
Genomic location |
chr12+:8940306..8947721 |
Exon number |
3 |
Exons |
8940306..8940349,8941140..8941382,8946901..8947721 |
Genome context |
|
Sequence |
000001 GTGAAGCCAG CTGGGCTCCT GAATCTGGTG GGGCTTTGGA GAACACATCC GAACATCAGA AGGAACAAAC TCCAGACGCA 000080
000081 CCACCTTAAG AGCTGTAACA CTCACCGCAA GGGTCCGCAG TTTCATTCTT GAAGTCAGTG AGACCAAGAA CCCACCAATT 000160 000161 CCGGACACAT TTTGGCGACC CAGATGGGAC TTTCGCCTAT CACCAAGCGG TGAGACCATC ACCTATAGCT GAGCGGTGAG 000240 000241 ACCATCACCT ATAGCTGAGC GGCGAGACCA TCACCTATCA CCAAGCAAAT CAAGGCCATC AAGCTACAGA TGGGCTTACA 000320 000321 AATGGAACCC AAAATGAGTT CAACTAACAA CTTCTACCAA GGGCCCCTGG ACCGACCCAC TGGCACTTCC CCTGGCCTAG 000400 000401 AGTTCCCCTC TGAAGGACAC TACAACTGCA AGGCCCCTTC TTCACCCCAT CCAGCAGGAA GTAGCTAGAG CGGTCATCGG 000480 000481 CCAAATTCCC AACAGCAGTT GGGGTGTCCT GTTTAGAGGG GGGATTGAGA GGTGACAGCA TGCTGGCAGT CCTCAGCCCT 000560 000561 CACTCACTCT TGGCACCTCC TCTGCCCGGG CTCCCACTTT GGTGGCACTT GAGGAGCGCT TCAGCCCACC GCTGCACTGT 000640 000641 GGGAGCCCCT TTCTGGGCTG GCCAAGGCCA GAGCCGGCTC CCTCAGCTTC CAGGGAGGTG TGGAGGGAGA GGCTCAAGCG 000720 000721 GGAACTGGGG CTGCGTGCGG CGCTTGCGGG CCAGCTGGAG TTCCGGGCGG GCGTGGGCTT GGCGGGCCCT GCACTCAGAG 000800 000801 CAGCCAGCCG GCCCTGCCGG CCCCGGGCAG TGAGGGGCTT AGTACCTGGG CCAGCAGCTG TGAAGGGTGT ACTGGGTCCC 000880 000881 CCAGCAGTGC CAGCCCACCG GCGCTGCACT CGATTTCTCA CCGGGCCTTA GCCGCCTTCC CATGGGGCAG GGCTTGGGAC 000960 000961 CTGCAGCCCG CCATGCCTGA GCCTCCCACA CCCCCTCCAT GGGCTCCTGT GCGGCCCGAG CCTCCTCGAC GAGCGCCACC 001040 001041 CCCTGCTCCA CGGCACCCAG TCCCATCGAC CACCCAAGGG CTGAGGAGTG CGGGCGCACG CAGGGGAC |
Predicted Small Protein
Name | NONHSAT026367_smProtein_539:832 |
Length | 98 |
Molecular weight | 10337.7185 |
Aromaticity | 0.0824742268041 |
Instability index | 66.2422680412 |
Isoelectric point | 12.0005493164 |
Runs | 14 |
Runs residual | 0.0127911416571 |
Runs probability | 0.0381810381811 |
Amino acid sequence | MLAVLSPHSLLAPPLPGLPLWWHLRSASAHRCTVGAPFWAGQGQSRLPQLPGRCGGRGSS GNWGCVRRLRASWSSGRAWAWRALHSEQPAGPAGPGQ |
Secondary structure | LEEEELLLLLLLLLLLLLLHHHHHHHHLLLLLEELLLEELLLLLLLLLLLLLLLLLLLLL LLHHHEEEEEEEELLHHHHHHHHHHHLLLLLLLLLLL |
PRMN | - |
PiMo | - |