NONHSAT026376

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT026376

Source

NONCODE4.0

Same with

,

Classification

sense

Length

427 nt

Genomic location

chr12+:9102703..9162112

Exon number

4

Exons

9102703..9102832,9144802..9144906,9161571..9161671,9162022..9162112

Genome context

Sequence
000001 GTTCCGCCGC GTGGAAGCTT CGAGTCTCGA CTCCACTGTT GACCCCTAGA CGAGAGTAGT GCAGCGACGG GGCCGTGATG 000080
000081 TGCGTCCTGG CTTTCTTAAC GACACCTCTC CTCTGTATTT CCTTTTTCCA CTTCCTCTTC CAGGCCTTCT TGTTCTTGCC 000160
000161 TTGTGGCAAT AGCTTTGGGG CTTCTGACTG CAGTTCTTCT GAGTGTGCTG CTATACCAGT GGATCCTGTG CCAGGAGCCT 000240
000241 GCTCCAAGTT TTCCTCAGTG AGGCCTTTTG CTGGATTGGT CTGAGGAACA ATTCTGGCTG GAGGTGGGAA GATGGATCAC 000320
000321 CTCTAAACTT CTCAAGGATT TCTTCTAATA GCTTTGTGCA GACATGCGGT GCCATCAACA AAAATGGTCT TCAAGCCTCA 000400
000401 AGCTGTGAAG TTCCTTTACA CTGGGTG
[back to top]

Predicted Small Protein

Name NONHSAT026376_smProtein_77:283
Length 69
Molecular weight 7184.4008
Aromaticity 0.147058823529
Instability index 40.9779411765
Isoelectric point 5.36102294922
Runs 7
Runs residual 0.037559618442
Runs probability 0.021803315921
Amino acid sequence MCVLAFLTTPLLCISFFHFLFQAFLFLPCGNSFGASDCSSSECAAIPVDPVPGACSKFSS
VRPFAGLV
Secondary structure LEEEEELLLLHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLEELLLLLLLLLLLLLL
LLLLLLLL
PRMN LLLLLLLHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
LLLLLLLL
PiMo oooooooTTTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiii