NONHSAT026886
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT026886 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
2835 nt |
Genomic location |
chr12+:10705975..10712295 |
Exon number |
3 |
Exons |
10705975..10706120,10706698..10706732,10709642..10712295 |
Genome context |
|
Sequence |
000001 cttgcttggc ccactctcac tctgtggagt gtacatttgt ttccataaat ctgtgctttt tttttcattg ttttgtttgt 000080
000081 gcatttcatc caattgtttg ttcaaaatgc caagaatctg gacaccctcc accagtaaca ggtaactttt tttttggcaa 000160 000161 tgggtccttt tctcactttt tCGATCTCTT AAAAAGTGGT GGTTAGTGTT AGCAAAAGGC ATgcagggct caataaatat 000240 000241 ttgtggaaag aatgaaGGTA TGAATGAACA AATGTATGTA TGAATTAATA TCCAAATCTA GAGAGACAGA GTTAGAGGGA 000320 000321 TAACAGCCCA GTGGTTTTCT TATTCTCAGG GTTTTTCCCT CCCTCTCTTT CATGCCCTAG CCAGGCACTC TTTTTCGATA 000400 000401 ATTTGCAAAG AAAATACTAT GAAGAGTCTG AAGTAAAAGT TCACTTGTTG AACCCGATGT TTTCTTTCCC CCAGGCATTG 000480 000481 GGAAGGGGAA GGCAGAAAAG CGGAGTGCAA AATGAAGTGG TAGTGGGTGC TAACTAACAA GAGAACCTTT GAACACGATG 000560 000561 GGACAGAAAT AAGGTCATGC ATTTTCTACT ATCTGTCACC TGTGGACAAC TTGCCACTTC AACAGTTCTG GACACTTTTA 000640 000641 AGCTCCCCCG AGGAGAAGAT AGGAAACTTG GACACCCTGT GTGGGATTGA GAATCACAAA GGGGCAGTCT CGCACCTGGT 000720 000721 CAAGATAAAG CTGAACTGAA CTCTTCATTC ACAAGTGGGA TTCTCGTAAG AGGCAGGAAA GCAGGGACCG TCTGTCACTA 000800 000801 CAGACAGCAA GAAGAGGTGA ACCTTAATGA GGGAAGAAAA CAGATTCTAT TAGGGGAAAA AAACATTTAA TCAGAAAATA 000880 000881 AGGCTCTGGA AAGAAAAGGC CAATTGGGGC TTTGTCTGAA GAAATAACAG AGTATTTTTC TGCCAGAGAA AGCAAGTCCA 000960 000961 AGGGAGGAAT TTTCAGATTG ACCAAAGAGT ATTGGTCTAC ATCATTAGTA CTTTCAGTGA GAAATAACTG AAAATAAACT 001040 001041 AGAGCAAAAg ttccccaggt gtggttccag gaccagcaac tgaaacatca cctgggaact gttaaaaatg caaattcttg 001120 001121 ggctctccgc cagaatcact gaatcagaaa ctctgaaatg ggacccaata atcagcagct taacaagctc tccaggtgat 001200 001201 tcttatgcca aataaagttt gaaattccct gGTGCTGGCG CTGGAAGCAA ATGAGTCACA GCTGTGAAGA ATCCCTACCA 001280 001281 TTAATACCCT GGGTGGGATA AATAAAAATG GGAAACTAAA AAGTTAAATG ATCAGAGGTT GGCTGTAGTT CAAAAGTAAG 001360 001361 GATATACCTG AATATAAAAT TCTTTCTTAA CCTAAATGCA AAATGGGAAT ATGTTTAATC ATTTATATAG CATCTCACTG 001440 001441 GTtttttcca gcttgagaca tgattcacaa aaattgtata tatttaaaat gtacatgatg ttttgatata catatacatt 001520 001521 gtgaaacaat taccacaatg aagttaacat aaccatgacc tcacctagcc accattttgt gtgtgtgggg ttaaaaaccc 001600 001601 ttaagacctg ctcttagcaa atgtcaagta tacagtacct tattattaac tatagtcacc atgctgtacg ttaggtctcc 001680 001681 agaacttact catcttctaa ctaaaagttt gactaacttc tcccccagcc cccaacccct ggtaactacc actctaccct 001760 001761 ttgttactgt gtcttcaact tttttagatt ccacatacaa gtgagatcac gcaatatttg tgttttggcg tctggcttat 001840 001841 ttcacttaga atagtgtcct ctaagtttat ccatgttgtc acaaatagca ggatttcctt ATATATTTAT AGAATAAAAA 001920 001921 CTAGACCGAA TTATGCATTA TGTTTCTTTC CTCTTCCCAA TTTTTGATAC CTGAAAATGA TAATCTCCAG GTCAAGCCTA 002000 002001 ACAGAGCATT GCCTGTTGCC CGATGGTAAT AACACCAAGA GCAGGCGCAA TGCCTATATG GGGTCAATTT ATAGCCTAGA 002080 002081 CACATAGCTC TAAACACATT CTCAGTGATT CATTCCAATT ACTCCTCCAC CTGGTGGATT TACACTGGCA TTTTTCATGC 002160 002161 CCATCTAGGT TCTTCCTAGT ACCTCACCTT TTCGGCCAAC TTTCACTGGT CATCCATTGG TTAAAACTCA GTCAATGTCA 002240 002241 TATCATCTTG TCAAAGCATG TTCAAACCAA CAGtaaataa tatataaata atatctaata gtaaataata atggaaataa 002320 002321 ttatagtaaa taataaatag tatataaaat atataaCTAA ATGACACATA AGTGAGTTCT AGATCACTAT GCCAACTCAA 002400 002401 TCCTCCAACC TCATAAGAAC TGAAAATCCA TTATCAAAGA CACTATGAAA ATACAGCATA AAATAGACCC AGATACTTCC 002480 002481 TGAGAGGTTA ACAACATGTA GCCCACCAGA GGAAGAGCTG CAGCTGGAGC TAGCTGGGCT CTGTGAGCTA AAACCACACA 002560 002561 GGAAGCCTCA AGCACAGGGG CTCACTGTGT ACCAGGAGGC CCAGGGGGAC CCTGACAAGA CCTCCTCTCT TCTCCCGCTT 002640 002641 TCATCCAAGG TCTAGGAACA AGGCAAAAAG CTAATTCTTA AAATAACAGG GATTTAAGAT GTACCTTTAA ATCCTTGGCT 002720 002721 TGCTTTAAAT TTGGCTGCTT GAGTATGGAT TCTCCCCATA GGTTTACCGT AAGAAACATT CACATGATAA TGTGATATTG 002800 002801 TACTAAAGAG TCTGATGATT GAAAATAGAA TGTTT |
Predicted Small Protein
Name | NONHSAT026886_smProtein_1976:2086 |
Length | 37 |
Molecular weight | 4045.5363 |
Aromaticity | 0.0555555555556 |
Instability index | 72.4916666667 |
Isoelectric point | 7.95745849609 |
Runs | 7 |
Runs residual | 0.013986013986 |
Runs probability | 0.0346228581522 |
Amino acid sequence | MIISRSSLTEHCLLPDGNNTKSRRNAYMGSIYSLDT |
Secondary structure | LEEEELLLLLLLLLLLLLLLHHHHHHHLLEEEELLL |
PRMN | - |
PiMo | - |