NONHSAT026890
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT026890 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1880 nt |
Genomic location |
chr12-:10741078..10752434 |
Exon number |
5 |
Exons |
10741078..10742144,10744879..10744985,10746380..10746604,10750642..10750808,10752121..10752434 |
Genome context |
|
Sequence |
000001 TTCAGCCCTC AAATATTGAT TTTGAACATT ATTTTGCAAA GAGTACTAAG TGGTTGGTTA GTTGAGATAG AGGAATATGC 000080
000081 AGCTTTTGAC TATCTTTCCT TTCCCGTCAG TACCAGCTTT CATGATACAA TTTCCTCTTA TCACTTTGGT CAAGAGGTGG 000160 000161 GGCAGAAAAT TTTGAGTTAC AGTATCATTC GAAGAGAATT TATTTCTGCC TTTCATGTTA TAGCCCCTAA GGGATCCAGG 000240 000241 ACCCGAAAGG CCAGCTTCTC CCTCATTTTG AAATCAGTTT TCTCCACCTG CACCACTGCA TAGCACAGAT ACAGAAACCA 000320 000321 TCCTATTTCA GGATTTGAAT GCAAAACTTA CCTTCTTACT CTAAAGATGA ATGATCAGGG AGAGATTTAT TCAACCCTGA 000400 000401 GATTTTTGCA GTCTCCTTCA GAGTCACAGA ATAGATTAAG GCCTGATGAT ACTCAAAGGC CTGGGAAAAC TGATGACAAA 000480 000481 GGCAAATTCT CTGAAGACCA CGGGTCCTGT TGTGGAGTAA ACTGTTATTA TTTTACCATG CAGAAGAAAG ACTGGAAGGG 000560 000561 ATGTAAACAG ACTTGTCAAC ATTGTAGATC ATCCCTTTTG AAGATAGATG ACAAAGATGA ACTCGTATTT TACATTCACT 000640 000641 TTTATTCTCT TGGACTCTGT TTCTCAATGT TGGACCTAAG ATATTGAAGA CAGGCTGGAG CCCAGAGCCT TCATTCAATC 000720 000721 TCAGATTTAT GAAAATAATT ACTGGATTGG ATTATCATAT GATGAAAGGG AAAGTAAGTG GAAATGGATT GATAATGGCA 000800 000801 CATCTCCTGG AATTAATTCT ACAATAATGC GTTTTTCTTC TGGGAGAGGA GAATGTGCAT TTTTGACCTC AACAAGAATG 000880 000881 GCAACTATTG ATTGCATTCA AACGTACAAT TGTATCTGTG GGAAGAGAAT AGACTCTATT TTCTCTGATT CGGTGTGCGC 000960 000961 CAAGAAGAAA AGGTGAAAAT GGAATGTTTT CTTTTTTTGT TTCCCATAAT AATTTCTGAT TATAAATCAT TGCTTTTAAC 001040 001041 TGTGGGACTT AGTTAATTCT TCAAAAGATA AAGATGAACA GGAAGAAAAA GAAAATTATT TTGGACTATG ACTTTAAAGA 001120 001121 TCAGATGCCA TCTTTCTTCC TGGAGAAGAG GAGATTTTCT CTTTTGAGAG TGGTTGTTCC TTCCTTTAAT GTCCCTGAGG 001200 001201 AATTATTCAT TCTTTCTAAT TCTCAGAACT ACCTATACAA CCAGTTAGAG AACTCTGATA TTATATCCTG GGTCTTTTTT 001280 001281 CTTATCAATA GGATAAATCA TTCCAGCATC TTCTGGTTTT GAAAGCAGTT GTGAACTAGA ATGTAGTTAT TTTTTTCTTC 001360 001361 CCATCTAGAA GTTACCTCAT CTTTTAAAAC ATTTGTTTTG CTACAAAATA TAACTTCAAA CTTACTGAAA GTTGCAAGCA 001440 001441 TAGTACAAGG AACTTCTATA TAACCTTTAC TCATACTTAC TAGTTGTTTA TATTTTGCTC TGCTTTATAT TTCTCTCTTT 001520 001521 CTATCTTCCA CTTAATAATA AATTGAGGAC TTCATGTCCC TTTGTCTAAA TATTTTCCAA GATCAAGGGC TTTGTTTTAT 001600 001601 ATAATCACAG TGCAATTATC AAACTCAGGA AATTTAGCAT TAGTACAGTA CTATGATCTA ATCTGTAATC CATGTTCAAA 001680 001681 TTTTGTCAAT TGTCCCAATA ATGCCATTTA TGTGTATTTC TTAAAAATCC ATGTTCAGGA TAATTCAATG CATTTGATTG 001760 001761 TAATGTCTCT TTAGTCTTCT TTAATCTGAA ACAGTTCTTT AGGCTTTTTC TTGACCTTGA CATTTTAAAA ATTAACTTTA 001840 001841 TTGAGTTATA CTTTTCATGC AATAAAATGC ACTCACTTTA |
Predicted Small Protein
Name | NONHSAT026890_smProtein_1073:1321 |
Length | 83 |
Molecular weight | 10069.5758 |
Aromaticity | 0.182926829268 |
Instability index | 50.5768292683 |
Isoelectric point | 9.45306396484 |
Runs | 15 |
Runs residual | 0.0470251293422 |
Runs probability | 0.04646411117 |
Amino acid sequence | MNRKKKKIILDYDFKDQMPSFFLEKRRFSLLRVVVPSFNVPEELFILSNSQNYLYNQLEN SDIISWVFFLINRINHSSIFWF |
Secondary structure | LLLLLEEEEEELLLLLLLLHHHHHHLLEEEEEEEELLLLLLLLEEEELLLHHHHHHHHLL LLHHHHHHHHHHHLLLLLLEEL |
PRMN | - |
PiMo | - |