NONHSAT027027
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT027027 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(AS) |
Length |
567 nt |
Genomic location |
chr12+:13132809..13133486 |
Exon number |
2 |
Exons |
13132809..13132822,13132934..13133486 |
Genome context |
|
Sequence |
000001 AGCTGACTCA AAAGGGAGTG TCTGGTGCAG GCATGCAGGG AGGAAGAATG ACTCTGAGCT TGACCATTCA ACTTCGAAAC 000080
000081 TTTAACATCA ATGGATCAGC ACACACTGGT GTACGGTCTG CTATGCATGC AGCCCTGTGC TAGGCAAAAG AAGTATCAGA 000160 000161 CCAGGAACTG ACAGCCTCAC TGCAACAGGA AGAGAGGCTT CACACAATAA GCGTTTCATT CAACCAGGCT GGACCTGTGC 000240 000241 TTATTGAGTT GAACATCACT GAGCACAAAA TGCAAGCCAG ACACCATAAG AGCTGTAAGG ATGATAAAGA TGTCTTTCTA 000320 000321 CCCTCGAGAG CTCTAAGTGT GGTCAGGAGA GAAACACATG CAAAGATTAT GCTGGCTGGA AGGAAATGCT GGAATGAAGG 000400 000401 TGGAAGGTAC ATCCAGAATG TTCTGGGGGT GAGGAATAGC GAATGATGGG TTCTGACTTA GAACATGAAG GGAAGGTATT 000480 000481 AAGAAAGAGG TGATATTAAG CATTTATTGA GCATCTCTAC TTTTTTTGTG TATGTGACCT TGTTTGGAAA TACAATATCT 000560 000561 CTTCTTG |
Predicted Small Protein
Name | NONHSAT027027_smProtein_269:445 |
Length | 59 |
Molecular weight | 6693.6454 |
Aromaticity | 0.051724137931 |
Instability index | 50.9482758621 |
Isoelectric point | 10.028503418 |
Runs | 11 |
Runs residual | 0.0330617658204 |
Runs probability | 0.0355462414287 |
Amino acid sequence | MQARHHKSCKDDKDVFLPSRALSVVRRETHAKIMLAGRKCWNEGGRYIQNVLGVRNSE |
Secondary structure | LLLLLLLLLLLLLLEELLLLLLLLHHHHHHHHHHHHLLEELLLLLEEEELEEEEELLL |
PRMN | - |
PiMo | - |