NONHSAT027115
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT027115 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
512 nt |
Genomic location |
chr12+:15475711..15563700 |
Exon number |
2 |
Exons |
15475711..15475735,15563214..15563700 |
Genome context |
|
Sequence |
000001 GCTCTGGCTC TTTGTGCTGT TCAAGgagtg cctgtgagga tgtttccagg agagataagt attggaattg atggaccaag 000080
000081 taaagcaggt ggcatactcc aatatggatg ggcatgattc aatccattga gggctcgaat agagcaaaaa gacagaagaa 000160 000161 tgctgggttc acctgctctc tgctggacta cttgggttgg gacatctatc ttcttctgcc tttgatgctt ctggttctca 000240 000241 ggccttgaga tttagcctgg aatctacacc attgaccctc tagctttcag gcctttaaac ttcacttgac cttcctgcat 000320 000321 gtccagattg cagacagcag attctgggat ttcttagcct ccataatcat gtgagccaat atgtgataat aaatttcttt 000400 000401 AAAAATATGG ATTAGTAAAA TTTGCATCCT AATGAAAATG TAAGCATTGT GACAGAGAAT GCTTTAGTCA GTCTCAAATC 000480 000481 CTAAATTTGA GATTGAAATT TAAGATAGCT TA |
Predicted Small Protein
Name | NONHSAT027115_smProtein_107:247 |
Length | 47 |
Molecular weight | 5240.2374 |
Aromaticity | 0.0869565217391 |
Instability index | 55.4043478261 |
Isoelectric point | 9.09967041016 |
Runs | 9 |
Runs residual | 0.0342908902692 |
Runs probability | 0.035515908065 |
Amino acid sequence | MGMIQSIEGSNRAKRQKNAGFTCSLLDYLGWDIYLLLPLMLLVLRP |
Secondary structure | LLLEELLLLLHHHHHHHHLLLHHHHHHHHLHHHHHHHHHHHHHLLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLL |
PiMo | oooooooooooooooooooooooooTTTTTTTTTTTTTTTTTTiii |