NONHSAT027206

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT027206

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

8981 nt

Genomic location

chr12+:19686271..19766379

Exon number

19

Exons

19686271..19686837,19690488..19690620,19692569..19693621,19694909..19695147,19697427..19698194,19699377..19699798,19705361..19706133,19706144..19706764,19712377..19712485,19713096..19713259,19727108..19727556,19728532..19729201,19734776..19735672,19737914..19738593,19741381..19742135,19748742..19748933,19765862..19765890,19765898..19765922,19765942..19766379

Genome context

Sequence
000001 TCACTAGTGT GAATGAGAGT TAAGCAGATA CAAGGATCAG GGATGTATTC TCAGACTGTA TGTTATGCAA TTTATATCAG 000080
000081 CTTAGATTAA GCATTCTCAG GCAAAATTAA AGTACAGTAT TTCTGTTTTT ATGATTAATT GTTTTCCACT CTGTTTAAAA 000160
000161 TGCAGGAACT CGAAGAAGAA GGAGGAATCA AATGAGGAAA AAGGAGAAAT CAGTTATCTT AGGCAGTTTG AGCTGCTAAC 000240
000241 AAAGTAGCAT AGACTGGGTG GCTTATAAAC AACAGAAATG TATTTTCAGT TCTGTAGATT GAAACTCTGA GATCAGGGTG 000320
000321 TCAGTATACC CAGGTTCCGG AGAATGTCCT CTTTCAGGCT GTCTTGAGAC TGCTGTCTTC TTGTAGTCTC ACATTCTAAA 000400
000401 AAGCTTATGG GAGGAGAGCT CTCTGGGGGT GTCTTTCATG ACACTAATCC TATTCATGAG GGCTTTACCC TCATGATGCC 000480
000481 TCCCAAAGGC CCCAGGAGGG CCTTACTATC TTATTACTAT TACATTGTGG GTTAGGATTT CAACATGGCT TTTGGGGAAC 000560
000561 TCAAACAGGG CAACAGAGCA AGACTCTGTC TCAAAAAAAA AACAAAAGAA AAGAAATACA CTTACATAGA TGAATAATAA 000640
000641 AACCAGGCAC GGTGGTTCAT GCCTGTAATC TTAGCACTTT GGGAGGCTGA GGCAGGAGGA TGACCATGGC AAGAGGGAGA 000720
000721 GTGGCACAAA GCAAGGCTGG AAAGTTAGGT GCTAGATCAC GCAGGGCCTT AGAGGTCATA GGATTTCATC CCGAGACAGC 000800
000801 CATTGCAGGG CATTTAGTAT GGTAGGGCAT GATCAGATGT TAATTTATAA TGTTATGAGA ATAGATAGGA GAAAGTGTGT 000880
000881 GGATACAAGG AGGCCTGTGG GATGACCATT GCCATGGGCC AGGTGAGGGA AGATGTTAAC TTAGATTGGT AGAAGTAATG 000960
000961 ATGAGAAGAA ATGAGTGGAT TTGAGAAATA CTTGGGAAAT ATATCACTAG GATTAGGTGA GGTTTCTGGC TTGAGCAACT 001040
001041 GCATGACTTG GTCCCATTGT GTTGAGAAAG GGAAGCGAGC TCTGGAGGAC TAATCCCTAG GTTTGGCCTA CATTGATTGT 001120
001121 TTATAAACAG TGACCAAGAG ACAGACTAGT TGGAGGATTT TTTCCTTTGT CCCTTTGTTC TCTGCTTAAG GCAGAGAATC 001200
001201 TTAATCACCA ATCAGATATT ACCTGACCTG CTTTTCAGCT CTCTGACAAA GATGTGTGTG AATTACAGAG TGGATATTTT 001280
001281 TGTTTTTTTT TCACATTTTG TCCCATTTGT TTCTTCTTTC TCTCTGACTC AATTCCCCTC ATTATAAAAA ATTTTGATTG 001360
001361 ATACTTAATA ATTGTACATA TTTATGGGGT ACAGTGTGAT GTTTTGATAC ATGTATACAT TGTGTAAAGA ACAAATCAGG 001440
001441 GTAATTAGCA CATCCCTCAC CTTAAACATT TATTTCTTTG TGAACATTTG AATAGCTCTC TTCTAGCTGT TCTGAAATAT 001520
001521 ATCATGCATT ATTGTTAACT CTAGTTATTC TACTGTGCAT TAAAACTCCA GAACTTATTC TTTCTATCTT ACTGTAGCTT 001600
001601 TATACCAATT GACTAACCTT CCCCCTGCCT CCCTATCTTC TGGTAACCAC TATTCTACTC TGTACTTCTG TGAGAACAAC 001680
001681 TTTTAAGATT CCACACATGA GTGAGATCAT ACAGTATTTG CCTTTCTGTG CCTGGCTTAT TTCACTTAAT GTATCAGTAG 001760
001761 AGAAGGGTTT CACCATGTTG CCCAGGCTGG TCTTGAACTC CTGACCGCAA GCCATCCGCC CACCTTGGCC TCCCAACGTT 001840
001841 CTGGGATTAC AAGCATGAGC CACTGCCTCT GGCCTATAGC TGTTTACAAA ATGAGGACCC AATCAAGGAG CAAGTGGTAT 001920
001921 ATTTATTTAT TGTATCTCTT TAAATCTCTT TTAATTTATC TAGGACAGTT CCTTAAACTA ATTATGTGTC TTAAGACAAA 002000
002001 GCTGGAGATA GGTGTGACCT GGCCCTTGTT CATAAGCCTG GGATGTGATT TGATTCTTAA CTCATTGCAT GTGGAAAGTT 002080
002081 CATTGATGAG GTAATTGGAG CTCAACTCCT GATCACTTGA GCAAAGATAA TAACACTGTT GAGAATCTGT TATTAGTTGC 002160
002161 TGTGGTGAGA AAAACCAATT GTATCTAACT GGTGTTTAGG TTTTACTAGG GTAGAATATA TTTTGGTGTA TCTTGAGTAT 002240
002241 CTAAAGAACT GGTCTATTTC TGGTTAATGG GATAATCTAG GAATTTAGTC AAAGTATGCT CAGCATGGTC TGGGAGCTTA 002320
002321 TTAGAAATGC AGAATCTCAG ACCCCACCTC AGACTTATTG ACCCCAGAAT ATGCATTTTG TTTGTTTGTT TTTGGTTTTA 002400
002401 GACAGGGCCT CACTCTGTTG CCTAGGCTGG AGTGCAGTGG CACGATCATA GCTTACTTCA GCCTCAATCT CCCAGGCTCA 002480
002481 AGCGATACTC CCACCTCAGC CTCCTGAATA GCGGGGACTA CAGGTGTGCT CTACTGTGGC CAGTGAGTTT TTTAAAAAGT 002560
002561 TTTTAGTAGA GATGAGATCT TCCTATGTTG TCCAGGCGAA TTCCTGGTCT CAAGTGCTCC TCCCACCTTG CCCGCGAATG 002640
002641 TGCATTTTAA CAAGATTTCC AAGCGATTAA TGTGTCCCTT AAAGTTTGAG AGGCACTGCT TTAGTATATT GATTTTGTCA 002720
002721 CAGGCATTGA GGGTCCCTAA GGAGAACTGT TGGTAAATAT GAAGATTGTT TTCTTATTAG CCTTATTAGC AAAAAGAAAA 002800
002801 AAAAAGAAAG AATAGAAAAA ACCCTTACAA AATATTGGCC AGTTCAGGTG AAGCAATAAA GATGTTTGAG GGAAAATGAT 002880
002881 TCTAATCGTT TTAAAGCTAA AGCTGAGGAA TTGGGCTATC TAAATGTAGC TTTAGGATTG CCATCGGTTG CACGAGCTTG 002960
002961 CTTTCTGTTT GTGAAGGAGA ACTTGCCTGT TGAAGAAATG CGGCACACAA GCTGTAATAT AACAGGAAAG GAAGGCTTTT 003040
003041 TGTGCCAAGA AATCACTCAC GTGAGCTGGG ATCCTTTTAA CAAATCTGGT GGCAAGCTCT TTCTGAAAGC TTGAATGAAG 003120
003121 AAGGAGATAA TCTAAAATTG TGTTCATGGC AACCACCCTC AGCCTTTCAT ATGGAGTTTG CTTTAAATTT TGTTCATATA 003200
003201 AAATTTTTTC GATAACTCTA AGTAGTTCAA TTAGGCAGGA ACATCTGAGT TACTTACTTT TGAACTTACT GTGTTTTGTT 003280
003281 TGAAAATCAT GTAATTTGGG AGGACTCTGG AACTGTTGTG TAAGATTTCA CTGCATGAAA TACAAGTTGA GCAGTTTTAG 003360
003361 TCACACTAAA AATGAAACTG GGTGACAGAT CATTCCCACT GTACTTTCTT ACCTTCAAAA GATTTTCTGT GAAACTTAGA 003440
003441 GGCACTTGCT CTCTTATCAT ATGCTGTGTT AGAGCGGTGT GGTTGGCCAG TAATTGAGTA ACAATGCCAG ATTGGCATTT 003520
003521 TTCATCAGGA GGTGCAGTCT TGTTTTATTT ATCATCATAT TTCCTCATTA AGTTTAATTT TCTTTTTCTT TTCTTTCTTT 003600
003601 TTTTGAGATG GAGTTTCACT CTTGTTGCCC AGGCTGGTGT GCAATGGCGC GATCTTGGCT CACCGCAACC TCCGCTTCCC 003680
003681 GGGTTCAAGC GATTCTTCTG CCTCAGCTTC CTGAGTAGCT GGGATTAAAG ACACCCGCCA CCACGCCCAG CTAATTTTGT 003760
003761 ATTTTAAGTA GAGACGGGGT TTCACCATAT TGACCAGGCT GGTCTCAAAC TCCCGACCTC AGGTGATCTG CCCACCTCGG 003840
003841 CCTCCCAAAG TGCTGAGATT ACAGGCGTGA GCCACCGTGC CCAGCCAAGT TTAATTTTTA CACCAATGAT TCATTTCTGC 003920
003921 TTTTACAGGT GATTACTTTA TCTCACTAGA AAAAAAATCT AAACAAAAAG TGTCCAAAAC TTACAATAAG CCTTAATCTC 004000
004001 GAATAATTAC CATGACATGT GTTACTTGTG TGCTTATTGC TGTACAGCCT TCTTTGGCTT CTGACAAGAG CAACTGCTGA 004080
004081 GCAGAAGCAC TTCAGCCTCG TCTGGCATTT GATGAATTTG ATTAATGTGT GCTATGGTAA GTCTATTCCC CTGTATAATT 004160
004161 TTATGGGAGA GGCCATGTGC AAGTCTGAAT TTAAAAAAAA GAAAAGAAAA AGCCTTGTGC AGAATTATTA CCTACTCAAT 004240
004241 ACATTATATA TATGCCAGAG ATGGCTAAAG CAGCTATATG TCAAGGTCTG CAAAAACATG AAGAAGCTGG CATGGAAATT 004320
004321 AACACGTTGG TGGTCTGCAA TGTGTTCAAA GTTGGTGTTT TTAATGACAC TTAAAAATAG TTAAAATATG TAATGGCTGA 004400
004401 TTTCTGACCA GACTAAACTC TCAGCCTGTC TAATGTTAGG CAGCTTGATC TAATCAATCT CATCCTTTTC TTTTCCTCAG 004480
004481 TCCAATCTTG CAATTGCTAT GTCAGTTTCA GTTCACAATA ATACCAGTGC AGACATGGCT CCTTAAGATT TTCTCCTTTT 004560
004561 CCCTCACGCG GGTCGGAAAA GAAAGTATGC TGGATAGCAA TGGAGAGCTA ATGAGGCAGT AAAGGAATTA TGGGACCAAG 004640
004641 ATTCAGGAAA AGGAAATTCA AAGAGCTGAA CCCAACATTG CAACTAGAAA TAAAAAAATA ACCGAAATTA AGAACTTAAT 004720
004721 CGATGGATTT AGTAACAAAT TAATTATAGC TGAAGAGGAA ATTAGTAAAT TATAAGGTAA GTCAGAAACA ATTACCCAGA 004800
004801 ATTATGTACA GAAGGAATAA AAGATGGAAA AATGTGTATG AACAAAACTG GCAGCTTTTC CACGAAGCGC TGCTGTGCTG 004880
004881 GAGGCCTGTC TTAGTTCCTA ATCACAGCTT CCCTCAGGAA CCTGGGGGGC AACAGGAGAG AGGATGGCAG AGCAGCAAAA 004960
004961 ATGGTGGCCT GCCTGCATCC TCTAGGAGCC GTGGCCCAGG GAAGTGGAGA GTTGCCCCCC ACCTAAGAGT TAGGCGGGGC 005040
005041 TGGCTGCGCT AGGGTCCCAG GCCAGTGGGT CTTGTCCAGT GAGGTGCAGT GGTGCGAGGC TCAAACTCCT GGGCTCACAC 005120
005121 AATTCTCCTG CCTCGGCCTA AGTGCTGGGA TTACAGGCAT TAGCCACTGC GCACTCTACC TTTTTTTTTT TTTTTCTTAT 005200
005201 TTTTTCTTCC AAACAGGATT TTGAGAGCCA AAAGAAAGGA ACTGAAAGAA TCTAGGCACA TTATACTATA GCTATATAAT 005280
005281 TAGCAAGAAA CTTGAGGAAC ATATCTCTCT TTGTCACAGT TCCAGAAGAA TTCCCAGGAA TTTAGCTTTC CCTTTACTCT 005360
005361 AATCTCAGAA GGAGCTATAC CCTCTTTGAA GCTCCATAGA GAGAAATAGG AACAAACTTA CCCAAAACAC ACGGTGGGTA 005440
005441 TGAGTGCTGA TTTTTATCCC CATGGAGAAA GGGAATTTTA CAGCAATGAG CATAGGGTCT CTGGTGAAAG GTCATATCCA 005520
005521 TACATATCTT TATAGAAAAA AAAAAAGAAG GCTTGGAAAT AGTGAGAACA AAGCCCAGAG CCCAGGGCTT GGTGGGAAAG 005600
005601 CAGGCCCTGG CTCCCCTTCC TGCATGTGAG TTTTGACTTC TTCCTGTGCT GGTCAGGGCT GCAAATGGCT GATAATATCA 005680
005681 CTGAAGCCTG GACTATCTTC AAAGCCCGAC TGGCACAAAA TGACATATTA ATGTAGTATC TCATTTCCTT TGCATTCTGG 005760
005761 GGACAAGTGG GATTGGCTCG ATGCCCAGGG ATATCCTGTG AACTCATGGA ATAGGACTGG GCTAAGCCTG GCTAGCACCT 005840
005841 GACAGATCCT GTCTATGGAA CTAGGGACAT TTTTTCTCAC TGCTTGAATT GGTTGGAACA TAAAACTAAG ATGGCATTTG 005920
005921 ATCTGTCTTG CAAAGATTTG GTTCAGAAAA ATCTTACAAA TATGCTTTTG ACCGGTAGGT TTCATATTAA AGGGCATGGC 006000
006001 CAGCGAGACT GCTGCTAAGC TGGGGGATCC CTAAGTTCCA GAAGAGATTT GTTGAGGGGC AACAACATTG ACATTGTCTA 006080
006081 TTCTGGTTCT TCCCAGATGG TTCAGTCTTA TTTCACTGGA GATAAGTCAG TCTTTCTCCT GGTGGTGGAG GTGTGGGGGT 006160
006161 TGTGTGACTG CTAAACGTTC TGGTCAAGGA GGTAGGGACA AAGAGAAAAC CAACGTATGC ACTGTCAGCC AATTCCAGCG 006240
006241 TCCAGCCCTG TCTCTTTCTC TCACCCTCCA TGGTAATCAG TGTTTCTGAG TTTGTAGACC TTCTGGGGGC TCTGCTGGGC 006320
006321 AGACCTTCCA TCCTTATCCT TAGCCCTCTG ATGTGGTTTG TCTCTGTGTT CCCACCCAAA TCTCATCTTG AATTGTAATC 006400
006401 CTCGTGTGTC AGGGGAGGGA CCTAGTGGGA GGTGATTGGA TAATGGGGGC GGTCTTCCCC ATGCTGTTCT CATGATGGTG 006480
006481 AGTTCTCACC AGATCTGATG GTTTAAAAAT GTGTGTCAGT TTCCTCCCTC TCTGTCTCTC TTGCTGCCTT GTGAAGAAGG 006560
006561 TGCTTGCTTC TCCTTTGTCT TCCATAATGA TTGTAAATTT CCTGAGGCTT CCCTAGTTAT GCAGAACTGT GAGTCAATTA 006640
006641 AACCTCTTTT CTTAAAAAAT TATGCAGCCT CAGGTAGTTC TTTATAGCAG TGTAAAAACA GACTAATACA GAAAATTGGT 006720
006721 ACGAGGAATG GGATACTGCT ATAAAGACAC CTGAAAATGT GGAAGCAACT TTGGAACTGG GTAACGGACA GATGTTGGAA 006800
006801 GAGTTCGAAG GCCTCAGAAG AGGACAGGAA GATGTAGGAA AGTTTGGAAC TTCCTAGAAA CTTCTAACCT CCAAATTTTG 006880
006881 TTGAGATTCT CTGCTGATGT GTTTCCTTTG TTTCCTGTTC TCTCTATCAC TTAGAGTTTG TTGTATTTAA TACCTTTGCT 006960
006961 ATCATTTTAT TGTGGTTTTG GTTGGGAGAG GAAATAAAAT GGCCAATCCA CTACCTCGAA AATAAATTAG TACATTTATT 007040
007041 TGCCTATCTT CATCTCCTAA CTAGTCTGTG AGCTCCTTAA GGGTAGGGAA GGTTATTATT CATTTTTATA TACCCAAAGT 007120
007121 ACATCAGTCA CAGCCCAGCC AGAAAAATAG AAACCACAAG AAAGATTTCA CCAGAGGGAA TTTACTAGAG GAATTAGTTT 007200
007201 ACACATGTAT TAGAGGATAG AAAGGACAAA AGGGAGCACT GGGCTCACCT GGAGATATTA CTGAGGAAGC TGCTACCAAC 007280
007281 CTAGCCCTGG GGGAACCAAA CAGGGGAAAC TGGGATTGTC AAAAGCTCTA GAACCTCAGA GTAGGGGACC TATGTAGTGG 007360
007361 GAGCTCAGGC CACTGAGGGG TGTTTATGAC CAGGTTGTAG TTGGACCTCT AGGGCCCAGT GTTGATGTCG TAGGGATCTC 007440
007441 TGAGGGCCAG TGATGAGGCT AGATGTGAGT TGCCAAAAAT GTTCAAGCAG AAGCCAGCTG TTGCAGCTGG GGCTAAGTGC 007520
007521 CACTGACAGG AACACTAAGC AAAAAGTTAT TTTCATTTCC TGAGCTGGGA AATTTACCTT TTCCAGCAAG ACAGAAGATT 007600
007601 GATGAGAAAG AGATTATACA TCTATTCAGA ATTATCTGGC ACAGTGCTAT AAGTATTTGA AGATGATGGT GATAGGAAGA 007680
007681 ATAAGAAAAT AAAATAGCTG TTTTATTGTG ATGTGAATAA AAATATTGCC ATCAAAGCTT ACTCAATAAT GCTTTGAGTT 007760
007761 TAGATACATT ATAAAAAGTC AAAAAACCAG GAAAAGCATT TTACGGTATA AATACCTCAT AGAATTAATA AAGGAAGCCC 007840
007841 TGTATAATTT AAAAACAAAA TCAAAAGGAA TCCCTGAACT TCAGTTTACA GACAGGCTAT AACAGATTGC ATGATGTGTA 007920
007921 CACGTCTGTA TGATTGGGTA GGATAGACTT CGCACAGAAT CTCCTGGCCA AGGGGGGCTG AGCCCTGGTG GGGCTCACTT 008000
008001 AGCCAGGAGG ACGGAGGGCC GTTTTCCAAT TTGTTTTCTT AGAGGAAATA ACTTTTTATA ATCCAACCCT GTCAAAGGGG 008080
008081 GCGCTTTTCC TAATTCATTA AAAGTCTTGC ACTAAGTTGG TAGTATAAAT ATTAATAAAG ACCAAGAAGA GTCCTTGGAT 008160
008161 AGCTGTAGTA GAACATTGGT CTAGAAATAC GTAGGCGCAA TTTTAAGTCC TTCCTGCGTC ACTAACCATG AATGTGGTCT 008240
008241 TAGCGTCTCT TAGTCTCATT TCCTCATTTG CAAAATTAGT TGGATTACCT CACAATGTTT TTTTTTTTTT TTTGAGACAA 008320
008321 GGTCTTGCTC TTTTACCCAG CCTGGAGTGC AGTGGCACTA TCATAGCTCA CTGCAGCCTC AAACTCCTGG GCTCAAGTTA 008400
008401 TCCTTGCATC TCAGCATCTC CAGTAGCTGG GACTACATGC ATGCACCACC TTGCCCAGCT AATTTTTTAA AAATTTTCTT 008480
008481 CCCTAGAGAC TAAGGGAGGA GAGTGGACAG CTAGCTGAAC TGAGGATTGA GAGGCTCTCT GGGCTACCTT GGAACTCTTA 008560
008561 GTCTTCCCTT CCTGAATGTG TCTTACCTGA ACTTTGAATT TCTTTAAATT TTACTGCAGA ACATATTGTT TGCGTTTCAC 008640
008641 ATTTGTTTCC ATGTTGCCAT ATAATTGCTC CCTAGCTCTG TTGAAAACAT ATTTTTGTTT TGGACGTGCA CGCATGCACT 008720
008721 TGTCTCAAAC CAAACAACTA ACGCAGGAGT GGAGATAGAG ATGATCTCTT GGACTTCGGT GTCTAGTGCA GTAGTAGTTA 008800
008801 GAGGTCAGAG TTCAGAATAA ATGACTTTTG TGTCCTGTCT GGGAATAGAA TTTGACAACG TAGTGAGTAA TTTAGGAAGT 008880
008881 GGCAAAGTTG TGTTTCTGTC TCTAAGTCCA GTATTCACTT TCATACCCAA GAAGCTGTCT GTTTTGTTTT GTTCACAGGA 008960
008961 AGGAAATAAA AGGATCAGGG C
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Predicted Small Protein

Name NONHSAT027206_smProtein_3503:3727
Length 75
Molecular weight 8727.0744
Aromaticity 0.27027027027
Instability index 57.8068918919
Isoelectric point 9.10028076172
Runs 10
Runs residual 0.00751483190508
Runs probability 0.0224783607137
Amino acid sequence MPDWHFSSGGAVLFYLSSYFLIKFNFLFLFFLFLRWSFTLVAQAGVQWRDLGSPQPPLPG
FKRFFCLSFLSSWD
Secondary structure LLLLEELLLHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHLLEEELLLLLLLLLLL
LLEEEEHHHHHLLL
PRMN LLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLL
LLLLLLLLLLLLLL
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