NONHSAT027310
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT027310 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(S) |
Length |
606 nt |
Genomic location |
chr12-:24072972..24102526 |
Exon number |
2 |
Exons |
24072972..24073548,24102498..24102526 |
Genome context |
|
Sequence |
000001 GACCCTGATT TACCTCAGGA GTTTGAAAGC TCTTCATGAG AAGATTCATG GAAACAATGT CAAGAAGCTT CTACTTCCAA 000080
000081 TTCATATGTC ATCTGCCCAA AAGTTGTGAT TCCTATACTC AACTTGGACC TAAATCAAAA TGGGAAATAA GATAAAAGAA 000160 000161 GCAGAAGTGC CAGTAGTCCA TGCTGGGAAT TTTGTCTTAG AGCTAGTCTA TTACTAATCT AGAGAGTCAT CTATCTAGGC 000240 000241 TACCACATTT TCATAAAGAT TGTAATAGGC AGTCTTAAAG TTTGTCTCTT ACTTGAAATA CACCAAGGGC CATCGCTAAG 000320 000321 TGAAATACAA ACAATATCTT AGAATTAGAA AATGACTTCA GGTAAATTAA AAGTAAACAA AAGGCAACTA TTATTAAAAA 000400 000401 CATTCTTTTC TATCGCTTTT TGTAGAAAAC ATTTAGTTGT ATTGGGAAAT TTCTATTTCG AAGTTTATTA AAACTAACTT 000480 000481 TTGTGGGGTT TTTTTTAGCA GAGATTAGAA AAGGTTTTCA GAGAAGGGAA AATGCCATAA GTGAGTAGAC TTTTAGGCAA 000560 000561 TAGCGCTGAT TAAATAAATG CCGATGTTTG GCAATAGGAC TGTGGA |
Predicted Small Protein
Name | NONHSAT027310_smProtein_35:154 |
Length | 40 |
Molecular weight | 4836.6198 |
Aromaticity | 0.179487179487 |
Instability index | 88.7566666667 |
Isoelectric point | 9.58868408203 |
Runs | 6 |
Runs residual | 0.0148944193062 |
Runs probability | 0.00789024318437 |
Amino acid sequence | MRRFMETMSRSFYFQFICHLPKSCDSYTQLGPKSKWEIR |
Secondary structure | LLHHHHHHHHHHHHHHHEELLLLLLLLLLLLLLLLEEEL |
PRMN | - |
PiMo | - |