NONHSAT027384

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT027384

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

741 nt

Genomic location

chr12-:26108087..26111483

Exon number

3

Exons

26108087..26108174,26109572..26109697,26110952..26111483

Genome context

Sequence
000001 AAAAACACAG CAAATGAATC AAACGGACCA GGTAGCAGGC AAGAGTGTGG TTATCGTTGG ACCAGGATTC AGGATCTGAC 000080
000081 TGAGTAGCTG ACTCTTAATC CAGTTTGTGT TGATCACCAG GAGGATCTGG ACCTCAGTAT TACCACATCT AGAGGTGATA 000160
000161 TGCCAACTCC ACCTTTGCCT TCCACCATGT TTGGAAGCTC CCTGAGGCCT CACCAGGAGC AGATGCTCGT CCCATGCTTC 000240
000241 CTATAAGCCT GCAGAACTGT GAGCCATAAT AAACTGTGAA TTATAAATTG CCTTTATAGC AATGCAAATG GACCAGTACA 000320
000321 GATGGGATGC TGGGAAGACA GTTGTTTCCA CCTTCAGTAA AGTCCGTGGA ACACAGTTGT GACTATATTC TAGGCCAGCC 000400
000401 AAGATGCTTG TACTCAGAAA GGAGTGGTCT CAGGACCATA AGAAAGTGAA AAAATAAAAA TAAGAAAATA AAGAAGGGAT 000480
000481 TGTCAATGAA TCAGAATTCA TCAAGGTCAA AGTCTTAGGA AATTCCTTCA TGAGGAAGTC TAGGGGGGCT ATGGAAATGA 000560
000561 AATTTTTAAA CAAATAGGTA TGTGGTGCTG GCAGGAATAA ATTATGGACT TATGAATATA ACATAAGATT CTTTATTACC 000640
000641 TGGTCTCACC CGTCTTTCCA CCTCTGCCCC CCTTCTTGCC CGACTCTGTG TATCACCCAT AATAAACTAC TTACAGCTTC 000720
000721 CTAGTGTTAA ATTTACCCTA A
[back to top]

Predicted Small Protein

Name NONHSAT027384_smProtein_326:448
Length 41
Molecular weight 4622.3586
Aromaticity 0.075
Instability index 72.545
Isoelectric point 9.69073486328
Runs 7
Runs residual 0.00302419354839
Runs probability 0.042243924597
Amino acid sequence MLGRQLFPPSVKSVEHSCDYILGQPRCLYSERSGLRTIRK
Secondary structure LLLLLLLLLLLLLLLLLHHHHLLLLEEEEELLLLLEEEEL
PRMN -
PiMo -