NONHSAT027395

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT027395

Source

NONCODE4.0

Same with

,

Classification

sense

Length

572 nt

Genomic location

chr12+:26348289..26440671

Exon number

4

Exons

26348289..26348464,26377226..26377312,26405801..26405853,26440416..26440671

Genome context

Sequence
000001 GCAGCCTGTC TGAAGTGCAG AGGTTCAGGC GGCCAAGGGA CCCGCGCCGG TTTCCGCGGG CGACCTGCAA ATCCTGCCCG 000080
000081 GGGCCCGGCA GGCGCTGCGT CCCGGCGCGT TGGCAGTTGG CGACCCCCCT CGAATCCCCC CTCTGCTGCG GGCTCCCCGT 000160
000161 GGCCTTTGGA GGCTCGGTCT GCTTAGTGGC CTATCTTGGC TTGTTTATGC TTTGTGTCTC ATATCAGGTT GACGAACGGA 000240
000241 CATGTATTCA ATTTTCTATG AAAATCCATT GTCATGACTT CTGAGCTGTT TGAAAGAGAA TGTTCTCAGA ATCAAGCCAT 000320
000321 TTGGAATGGA CAGAATGAAA CAGAAGTCAA AGAGCTGTCT ACACGTCCTT CCCAAGCTAT AATTAAGATG GAAGCTCATT 000400
000401 TGCCATTCTG AGGATTGGTG CAATCAAGCA TATGACAGCA AGATTTTGGA ACATTTTTAT CAGTTTTGGA ACCACAGCTC 000480
000481 CTCCATGGCC AAATTTCTCT TTATGTCTCA GGTTTCAGAG CATGGCCTAA TATTTCCCGT ACAGACAGGC CGCTCCGCTG 000560
000561 CCCTTCTGAT TC
[back to top]

Predicted Small Protein

Name NONHSAT027395_smProtein_431:529
Length 33
Molecular weight 3739.3494
Aromaticity 0.21875
Instability index 59.7875
Isoelectric point 10.3469848633
Runs 7
Runs residual 0.0271045918367
Runs probability 0.0320362379186
Amino acid sequence MTARFWNIFISFGTTAPPWPNFSLCLRFQSMA
Secondary structure LLEEEHHHEEELLLLLLLLLLLLEEEEEEELL
PRMN -
PiMo -