NONHSAT027468
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT027468 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
554 nt |
Genomic location |
chr12+:28317891..28318595 |
Exon number |
2 |
Exons |
28317891..28318007,28318159..28318595 |
Genome context |
|
Sequence |
000001 GATCAGAGAA TCCATGTTGA CCAAATGTAC CAGCACAAAA GTGGAATTGA ATCTTCTCTA AAAGAGAGCA AGCGATTTTT 000080
000081 TGACAAACTC CATAATGAAG TTAATAGTTA ACTGGAgAAA TTTTTAAAAG AAATTAGTAA GACTTTGGAA AAGATCAGCC 000160 000161 ACTGTGAAAA GTACATCAAC CATCAGCTTG AGCACAGGGT TCAAGAATAT CCTGCAGCTC AAACCCAGCT GAGTGATGTA 000240 000241 AGGAGCCAGC AAGGAAGTGG TGGAGTAATT GAAAGGACCA GACTTCTGTC TGAGGCTACA GAAGACAGAA CATGTAAAAC 000320 000321 TAGAAATGGA AGAAAAGTGC AGCAGCATGA CTGATGGTGA TTCTTTGGTT AAGAGGTGGT GATTCTTTGG TTAAGATTAA 000400 000401 ACAGAGCTTA ACAAAACTGA AGCAAGAAAC TGTTCAGATG GACATTAGAA TTGGTGTTGT GGAACACACA TTACTCTAAT 000480 000481 CAAAACTGGA GAAACCCAGT GTGACTAAGG ACATACACGT GACCATTATT CCAGAATCAG CAATAGATTC ATAT |
Predicted Small Protein
Name | NONHSAT027468_smProtein_353:478 |
Length | 42 |
Molecular weight | 4690.6163 |
Aromaticity | 0.0243902439024 |
Instability index | 47.856097561 |
Isoelectric point | 9.52093505859 |
Runs | 7 |
Runs residual | 0.00523716893611 |
Runs probability | 0.0320488555783 |
Amino acid sequence | MVILWLRGGDSLVKIKQSLTKLKQETVQMDIRIGVVEHTLL |
Secondary structure | LEEEEELLLLHHHHHHHHHHHHHHHHLLLLEEEEEEEEEEL |
PRMN | - |
PiMo | - |