NONHSAT027935

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT027935

Source

NONCODE4.0

Same with

,

Classification

antisense

Length

2979 nt

Genomic location

chr12+:48113034..48136077

Exon number

4

Exons

48113034..48113055,48113388..48113482,48132698..48132794,48133326..48136077

Genome context

Sequence
000001 GCCTTCCTGT GTTTTCTGAA TGTTCCCCCG CACTTTGCCT GCCACCATGT AAGATGTGTC TTTGCGCCTC CTTTGCCTTC 000080
000081 CACCATGATT GTGCGGCCTC CCCAGCCATG TGGAACGGCC CTGAAGGCAG CCCGTATTTG TCTGGATGTC TTCATTCTTC 000160
000161 CAGTCTAAGA ACTCCTAATT CATCTCTGCA CTCCCTGAGG CATCAGCACT TGAGAGTAAA CTCCTTTGAA TCCCTTGAGC 000240
000241 CCCACGAGGT GGATTTTCTC TCAAGAGCTC CCAGGCTATG CTGATGAAGT ACCTCTTCTC TGCTTCTCTC CAGAATAGTC 000320
000321 AAAACCCTCA AAATCCTCAA AAGTTCCTGG AGGTGGGAGG TTCCACCCCC AACTCTATCC TCGCCTCTTC TACTGGTCTA 000400
000401 GCCCGCAAGC CCCTCGGAGT TCCTGAGGGG CAGACAGGCC CTGGTGCACA CGGGCGCTCC ATGCCAGGCC CTTGGGCTCT 000480
000481 GGAGCCCCTG ACACTGCCCT GGCACCTCAG ACCCCAGGAC TGGACACCCA CATGCTCCAG CCCAGTCTTC ACACAGGATC 000560
000561 TCCTGCCCCC ATGCACACAC TGAGGGCCAG AATGCACCGT GCAACCCCTA TCCTAGTGCT GAACACCCCT TCCTCAGCCA 000640
000641 GCTCCCCAAA CTCACAGGCT GGAGCTAGGC CCTGGGCCGA GGTTGGGAAC CCTGAAAGTG ACAAAGGACG AGTAGAGGGG 000720
000721 CTGCAGGGAA GCCAAGAGTG AGGGTGTCTG GAGGGCAGGG CCGAGCCCAG CTGATCCTAG CAGAGCCAGG CCGGGCAGGG 000800
000801 TGGAGCACTC ACCAGCAGCC TCTCGAGGGC GGAGTACAGC TTCCGGACTT TGTGAGGCAG CCGCTGTGAA AAGGAGGCAG 000880
000881 ATGAGCGGCT GCTCTGGGGG AGGCCCAGCC CCATCCAGCA CTCCCAGGAG GGCCTGAGGC CTGACCTCAG GAGGGGGCCC 000960
000961 TCCAGACCAC ACTTACCTCC CAGGTGTGGG CTAGGCGGCT GATGGCCGAG TTGCTGAGGC CAAACATGAC GGCAAAGAAG 001040
001041 GAATTGAGAT TCTTCTGCTC CTTGAGGCTG TGAGCAGAAG ACCCAGAGAC CCTCAGGGTA AGGGAAGCAG CCACCCCTAC 001120
001121 AGTGCCCCCA GACAACAGCC AGGCCAGCCT CTGCAGAGAT CCAAGCTGGA TGGGGTGGGA AGGCAGAGAC TCCAGGGGAC 001200
001201 CCAGGGAACA AATAGGGTGG CAGATTTGGC AACATACTAA GCAAAGAGGG GGGCTTAGGA AAAGGTAGCC GGGGGACTCT 001280
001281 GGCCACGCCC TACCCACTGG ACAGGGACTC ACTGGGCCGC CAGCTTAATG AACTTCCTGA GCAGCTGGGC CCGGGGGCCG 001360
001361 GGCACGGGGC AGAGACACAG CTCGGTGGCC ACCCAGTACT GCAGCTCATT GAAGCGGCGC ATGAAGCGCT CCAGGTTGGC 001440
001441 GGTGGTGACA TCCCGCAGAT GCTGGGGGCC CAGCACATAG TGGATCAGCT CCACCTGGGT GGGGTCAGCA GGAGAGGTCA 001520
001521 GTGAGTGCTG AGCCGAGCCG GGCGCCCCGC CGCCTGCTCT CCTCCCCCAG CTCTGCCTCC CACACCTGGT GGATACTGTT 001600
001601 GAAGAGGCTC CAGTCGTGGT CCGTCAGCTG GCCTGCCAGG TCCTTGGCAC TCACCAGGTC CAGCCCCTCA GCAGAGCCCA 001680
001681 CAGTGGGCCC CAGCTGGTCA GGGTGTGGGA TCTGCGGGTG GGAGAGTGCT CAGGGGGCTG CCTGAGGAAT CCAGGGAAAG 001760
001761 GCACAGGGTA GGGGGAGAGG GTTGGGGCAA GGACTCTATG CTCGTGTTAG GAGGAGGGTT AGGAGGGCAG GAGTGGGGAG 001840
001841 TAGAGGGTCT CTAGGGGCTA TAGCAGCTGG AGGATAGGGC TCCCCAGTGC TGAGACCCCT CCTTTTGGGC TCCTGTCTCC 001920
001921 TGGGGAACCC CTAACTAGGG CAGGTCCTCC TCTTTCTCCT TGGGAGCTCC CAACCAGTGC TACCAGCCCC TGCCCTGCAC 002000
002001 TATCTTGGGA ATTCCCCCAT CAGCTGAGGC CCACTCCTTT GTGTGCTGAG GACCCAGCAG CAGCCAGAGC CAGGCCCCTC 002080
002081 CTCCCTCTTC TCCCTGGGAC CCTCCCCAGA ATCCACCACT GCCACACTCA AAATAGATCT CCTCCCTGGG CCCTGGCACC 002160
002161 CTGCCTGGTC CCTACCAGCT CATGCACTTC CTGTGGGTTG ACAACAAAGA GACGCTCATT GAGCCCCAGA GATGTGGCCA 002240
002241 CACCACGGGC ATCTGGCTGC AGGCCAATGG CATCTGCAAA GACAGCAGAG GCGGACTGGG TGGGGGAAGG GAGGGAGGCC 002320
002321 GGGGACCAGC TGGATGCCAG GGTGGAGGTG CTGTTTGGGA GGCTGAGAGG TTGTTTCTCC TAGTAGCGGG GTTGAAGTCC 002400
002401 TGGGTGGTGC TCAGAATACA CAGGTGCATG TGCCCACGCA GCCACGCAGC CCAGGGAAGC ACATCCAAGA GGATGAGAAA 002480
002481 AGATTCTCAG TGAGTCAGGA AGAACCTGGG CAGGGTCTGA GCCTCCCTCA GCCTCACTTT CTTCCCTGGT AAAATGGAGA 002560
002561 CAATAAGACT TGCCCCAACT ATTTCATAAG TCAAATAAAA TAATGTATAT AAATAGTAGC TATAAGTACA TGCTATGTAT 002640
002641 AAAAGCCCTT TGAAAATTGG GAAGTGTCTT ATATAAGCCT TGGTGTTGAT TTTCATCAGC TCCTCATGGA CTGGGACTGT 002720
002721 GCTTGAGTCC CCAGTCCCTA GAGCAGTGGC CTCCAAAGTA AGGTACATCA GATCATCCAT GTGCCTGGGG AAAATATGAG 002800
002801 CTCTTCTACT TACGTTTACT TTTTCTACCT GCTTTGCATT TCTACTCCAT CAATTTCTAT TTTATCTATT TTTATTATAT 002880
002881 TAATGTAGTA ATATATGTGT ATTACTTACA AACAAATATT CACACAGTGG GGTGTGGGTT TTAATTAAAT GTTGGTTATT 002960
002961 GAAAAAAAAA AAAAAAAAA
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Predicted Small Protein

Name NONHSAT027935_smProtein_53:283
Length 77
Molecular weight 8435.4308
Aromaticity 0.0789473684211
Instability index 54.8815789474
Isoelectric point 6.62738037109
Runs 9
Runs residual 0.0229885057471
Runs probability 0.0443286423678
Amino acid sequence MCLCASFAFHHDCAASPAMWNGPEGSPYLSGCLHSSSLRTPNSSLHSLRHQHLRVNSFES
LEPHEVDFLSRAPRLC
Secondary structure LEEEEEEELLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHLLEELLLLLL
LLLLHHHHHHLLLLLL
PRMN -
PiMo -