NONHSAT027976
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT027976 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(S) |
Length |
779 nt |
Genomic location |
chr12-:48448596..48449374 |
Exon number |
1 |
Exons |
48448596..48449374 |
Genome context |
|
Sequence |
000001 tatagGGTAA ACATCCAATT AAAAGGCAGA TATTGGCTAT CCTTGGGGAG GCCAGCAAAT TTCCGGATAA GGGAAGCTGG 000080
000081 TGGGCAGGAA AAAGGCATGC AATGGCCCTC ATGAGCCAGA AGAATAGCTG CTGACTGATG CCTGGGGGAC CAAGCCCATA 000160 000161 ATTGTGGAGC TGGAGCCGCA CTGTGTCCCT TGCTTCAGTC TGATCTTTGG GGAGCCTGCA CAGTTCTGAC CTCAGTTAAG 000240 000241 AGCTAAGGGA AGAGATTTGG GAATGTTTGG CCCTGTGTAA CAGCAAAAGG ATTCATTGGT GAGGGTGTCT GGCAGGTATC 000320 000321 CGTAAAGATA ATAAGATGAA GGGAACATCG CCGTTTGGAA AGTGTCGTGA TATGATACAC AAGTTGTGCT GCCTCTGTGG 000400 000401 CTCTAAGGCA TACCACCTTC AGAAGTCAAC CTGTGGCAAA TGTGGCTCCC CTGCCAAGCG CAAGAGAAAG TGTAACTGGA 000480 000481 CTGCCACGGC TAAAAGAAAA TACCACGGCG ACTGGTTGAA TGAAGCACCT AAACATTGTA TACTGCAGAT TTAGGCATGG 000560 000561 ATTCTTTGCA GGAACAACAC CTACACCCAA GAGGGCAGCA GTTGTGTCAT CCAGTTCATC TTAAGAATTT CAATGATTAG 000640 000641 TCACACAATA AATATTCCGG TTTTTAAAAa tgtatatatt ttaaacatat atatgtttat atgtatatgt tatatctgta 000720 000721 ttacatatat gtGAAaagag gcagagattg tcagattgga ttaaaaagct gtctgtaag |
Predicted Small Protein
Name | NONHSAT027976_smProtein_335:553 |
Length | 73 |
Molecular weight | 8153.639 |
Aromaticity | 0.0694444444444 |
Instability index | 57.3611111111 |
Isoelectric point | 9.76507568359 |
Runs | 13 |
Runs residual | 0.0396390916464 |
Runs probability | 0.043964779259 |
Amino acid sequence | MKGTSPFGKCRDMIHKLCCLCGSKAYHLQKSTCGKCGSPAKRKRKCNWTATAKRKYHGDW LNEAPKHCILQI |
Secondary structure | LLLLLLLLHHHHHHHHHHHHLLLLEEEELLLLLLLLLLHHHLLLLLLLLHHHHHHHHLHH HHHLLLLLEELL |
PRMN | - |
PiMo | - |