NONHSAT028131
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT028131 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
504 nt |
Genomic location |
chr12+:50101516..50109560 |
Exon number |
2 |
Exons |
50101516..50101622,50109164..50109560 |
Genome context |
|
Sequence |
000001 TCAGCCGGCA TCGAATCACC GCGGTTCCCA GAGGGCGTGA GGGGCTGGCG TGGACACACC GGGAATGGAC CGTACCCTTT 000080
000081 TTCAAAAGGA ACTCATGATG TATACAAata gaatgctctt ccccttcttt gctggccaat tcctactcat ctgttaaaac 000160 000161 caagcttaga gattacctct ttgatgacat ctctaccaag tctgattgag aacatctctg tgagcacata gtattctaac 000240 000241 atctctatca tcataccatg aaatcatcag gtaatgtaaA CTCCTTCAGG GAAGGTAGGT ATTCCTGATG TCTAGCTATA 000320 000321 GACCCACTCC ATGTCTGTTA CATGCTTGTT GAACAAATGA ATGCCTTTCC ACAGTCCCAT TTTTCCCACA TGATAGAAGA 000400 000401 TGTTTTTTGT tttgttttgt ttttgtttgt ttgctttttt gagacagagt cactctgtgg tgcaggctgt agtgcagtgg 000480 000481 catgatctcg gctcactgca acct |
Predicted Small Protein
Name | NONHSAT028131_smProtein_341:484 |
Length | 48 |
Molecular weight | 5284.1338 |
Aromaticity | 0.170212765957 |
Instability index | 49.0595744681 |
Isoelectric point | 4.23956298828 |
Runs | 6 |
Runs residual | 0.0386170212766 |
Runs probability | 0.0722781605134 |
Amino acid sequence | MLVEQMNAFPQSHFSHMIEDVFCFVLFLFVCFFETESLCGAGCSAVA |
Secondary structure | LHHHHHHHLLHHHHHHHHHHHHHHHHHEEEEEEELLLLLLLLLLLLL |
PRMN | LLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLL |
PiMo | ooooooooooooooooooTTTTTTTTTTTTTTTTTTiiiiiiiiiii |