NONHSAT028175
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT028175 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
1151 nt |
Genomic location |
chr12-:50526862..50528489 |
Exon number |
2 |
Exons |
50526862..50527851,50528329..50528489 |
Genome context |
|
Sequence |
000001 CTAGGATTCT GAACACGACC CTCTTTGAGA GTTGGGAGAT AATCGGGCCT TATGCTTCAT GGTGGCTCCT CAATGGCCTG 000080
000081 CTGCTGACCC TACAGCTTCT GCATGTCATC TGGTCCTACC TAATTGCACG GATTGCTTTG AAAGCCTTGA TCAGGGGAAA 000160 000161 Gatggaatct cgctctgttg cccaggctgg agtgcaatgt cacgatcttg gctcaccaca acctccacct cctgggttca 000240 000241 agcgattctc ctgcctcagc ctccctagta gctgggatta caggcgcatg ccaccaggcc tggctaattt ttgtattctt 000320 000321 agtagaaacg gggtttcact atgttggcca ggctggtctc taactcccga ccttgtgatc tgcccacctt ggcctcccga 000400 000401 agtgctggga ttacaggcgt gagccaccgc acctggccTG CCTGTTTTAC CTTTTAAGAT GTGACTTAGA CGCAAGAGGA 000480 000481 AAGTTCTACC TTCTTCCTGT CCCTTAGGAA TGGCTTTTGT TAAAGGATGA TAGGGTTAAG AGTTTTTTAA GAGATGGCCT 000560 000561 CAACCATTTC CTACCCCTTA CCTACCTGCT Tcagtggatt tcatattttt ctttttgaca tggggccctt ttcaaaggaa 000640 000641 atcatatgca gaaccatata aactgtataa aagcagaTTG TTAAGTTGCC TAGAAGTGGT GTGTGGTAGT TCACAAGCCA 000720 000721 CCACAAGGTG ACCATGCTGT GATATTCAAG ATATGGTTTA TATAAGGAAC TAAATACCCA CCTCACCCCA CTAGTGTATG 000800 000801 AGGCAAGTGT CCTAAGTGAA TGGGTATGTA GTGTTTCAAA TACCCATCTT ATGCCAAGAG CGAAAGAAAG GTGCCACTTA 000880 000881 ATGATAAACT CATAATTGAA CTTTGCAAGT TTTGAAGCAG TCAGACTGTA GTCAAAGGGC TAGGGATTTC AGCCTAAAGG 000960 000961 AATACAGAAT CCCAAGTGGG AGGGGCTCTG CTTGAGCAGG TACTGATACT AGGACCAAGT GATGGAATGT GGCCTAGATA 001040 001041 TTGATGATCT CCTGCATCAT TATTCCTTAT AGCTGCCATT GGCTCAGAAC TTGCTCAGTG TGCCTGTGCA TCTTGCTGTA 001120 001121 GCTACTGGAC ATCTCTGTTC TCTCCTGCTT T |
Predicted Small Protein
Name | NONHSAT028175_smProtein_161:421 |
Length | 87 |
Molecular weight | 9404.8149 |
Aromaticity | 0.093023255814 |
Instability index | 83.4534883721 |
Isoelectric point | 7.63079833984 |
Runs | 15 |
Runs residual | 0.034796945505 |
Runs probability | 0.037196019549 |
Amino acid sequence | MESRSVAQAGVQCHDLGSPQPPPPGFKRFSCLSLPSSWDYRRMPPGLANFCILSRNGVSL CWPGWSLTPDLVICPPWPPEVLGLQA |
Secondary structure | LLLHHHHHLLEEELLLLLLLLLLLLLLEEEELLLLLLLLLLLLLLLLLEEEEEELLLEEE EELLLLLLLLEEEELLLLHHHLLLLL |
PRMN | - |
PiMo | - |