NONHSAT028190

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT028190

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1732 nt

Genomic location

chr12+:50677451..50679182

Exon number

1

Exons

50677451..50679182

Genome context

Sequence
000001 CGCTGGCGAC GGGACAGGGT TTTTGCTGCC CGGGGCCTAG TCTACCTCGG CACGCTTTTC TCTGAAGGAG ACACGCACTT 000080
000081 GCACGACGTG GGCCTCTGTG CAGCTCTACT TTGTCCTTAA CTCCTCTGAC TCAACGTTAT CGCAGTTTGA CTCTGGAGCC 000160
000161 ACTCAGGTTT TTCCTAAGCT CAACTCTAGC CAGCTAGGTT CCTGGTGCTT TGGGGGTAAG TTGTGTGCAG GGAGGGTGTT 000240
000241 TTACAGGAGG CTGTGTGGTG TAGTGGAAAA AGCTGAATTA AGTACATTAA TCCTGAAAAC GGTTTGACAA GGGCAGATGA 000320
000321 CGTCCAAGTT CTCCAACAGC TGTTTTTACT CCTCCATTCA GAATAGGAGC TGTGCTAATG GTTTGGAGAC CGTCAATTGG 000400
000401 CCTAGCACTT GGCCATCCTG CCCCCAAATT CTTGTCCCAG TTCCGTGCCA GCTGCATGAT GCCTTTTGAT AGTATCCTTC 000480
000481 TTTCCTGTAC CTCAAGCATA GTAGGGTTTC AGACCACAAG TTTTCTGAAG CTTTTCGGAA TTCATGCAGC TTGATGCGTT 000560
000561 ATTAGTAGGG GCTGCTCGTG GGAAAACGCT TGTAATTACA CTTCCTCAAG AAGTTAATGA AAATGTGTGA GAAGAGAGAT 000640
000641 TTCCAACAGG TGATGAATAT GCCAGCCAGT TATTCCCTTC TTCCTTCAAA TATCCAGCCT AGACTGATTT CTGGATAGGT 000720
000721 ATtgtagaaa taaaaatttc agacaaaaca aacttagatt ttgaatcgga caacagtcag aaccaaaaga ggctcagaca 000800
000801 cccctgctct agctgcccag gcatcaaact ttataggctg aacacgaaag taaagaaatt tgattggcta cagctaagcg 000880
000881 tttgccttat ttgggtatgg tcacatggga ggtccctaat tatataacca cttggctggt tgtctgtttg tgattggttg 000960
000961 aaactcCATT CAAAATCAGG TACAAGGggc cgggcgcggt ggctcacacc tgtaatccca gcactttggg aggctgaggc 001040
001041 aggcggatcc cctgaggtta ggagttcgag accagcctag ccaacatggc gaagcaccgt ctccactaaa aatacaaaaa 001120
001121 ttagccggac gtggtggtaa gtgcctgtaa tcccagctac tcgggaggct gaggcacgag aatgacttga acccgggaag 001200
001201 tggagattgc agtgagcaga gatctcgcca ctgcactcca gcctggatga gagaacgaga ctccatctca aaaaaacaaa 001280
001281 acaaacaaaa GGTGCAAGGA ATACCTCTAA ATTTTGGGTT GCTTTCTGGG TACAAAAACA ACTCCAAACT AATGGCCTGC 001360
001361 TACTTATTTT GCATTAACAG TATCAAGTAT CAAGACTCCA GCAAAAGTGG CAGACAGCAT GGGAATGCTA AAGAGCATAC 001440
001441 AATATCAATA CAGGATAGTA CTCCAGAAAA TACGTTACCC TGCATGTGGC GTTCCCTCAA TAGATGTCTC CCCTCCCCCC 001520
001521 AATTTTTTTT AGCTCTGTGC TTTAGTGGAT ACAAAAATTA CTTGCTTTCC CAAAGCCTCC TTTTGAAGAT AGAGCTAGCA 001600
001601 TTAGgttgat tgctaaattt tcagggattt tatgagccag gtcataagca caaccattat tagaaatcaa attatataag 001680
001681 ctacaattaa attatcttaa aaataaaagt aataggccag gcatgttgag tc
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Predicted Small Protein

Name NONHSAT028190_smProtein_377:553
Length 59
Molecular weight 6316.4634
Aromaticity 0.120689655172
Instability index 64.4155172414
Isoelectric point 9.49847412109
Runs 9
Runs residual 0.0014209928003
Runs probability 0.0716500814541
Amino acid sequence MVWRPSIGLALGHPAPKFLSQFRASCMMPFDSILLSCTSSIVGFQTTSFLKLFGIHAA
Secondary structure LLEELLLLLLLLLLLHHHHHHHHHHHLLLLLLEELLLLLLLLLHHHHHHHHHHLLLLL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHLLLLLLLLLLL
PiMo iiiiiiiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTTooooooooooo