NONHSAT028247
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT028247 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
854 nt |
Genomic location |
chr12+:51632508..51640501 |
Exon number |
2 |
Exons |
51632508..51632704,51639845..51640501 |
Genome context |
|
Sequence |
000001 CGGACCCTCC CGCGGCCGAC TGGAGGCCCG GAGCAGGGGC GGAGTTTCCG GCGGCAGCGC CACTCGGGCG TCGGGTGACG 000080
000081 CTAGGCGGAC GGACCATCAT GTGACACGGA AGTAGCTCCG AACAGGAAGA GGACGAAAAA AATAACCGTC CGCGACGCCG 000160 000161 AGACAAACCG GACCCGCAAC CACCATGAAC AGCAAAGGTA AAAGAAGATC AAGATCACGA CCGAGAGCAG GGTGAGGAAG 000240 000241 ACAACGGTGA TAACAACTTG GAAAGGAGAG GGAAAATGTA GAGATGTTTC AGGATTGAGG ATGTCTCAGT AGTTCCTGGA 000320 000321 GTCATCTGAT TTAGTCACTG TTTTCGTAAA GATCCTCTTG TTTTCATTAA CTAGTGTCCA CTTCCATCCA AACCCATGTT 000400 000401 CCCCCACCAA CCCCAATTTC CATGGCACAT AATAGCTGGA GTCTCCTGGT GCTTAAGCTA AGGACACATG CTTTTGATTT 000480 000481 CTGACAAAAC TGAACTGCCT CCCAAACCAG TTCCTGATTC TTAAAGAAAC GGGAAGGAGG GAACAGGAAA TGGCTTATCC 000560 000561 TAACAGGAAG TGGTTTATCT GATCCTCCCC CTCTTCCTCA CCCACTCAAC CAACCACATA TATCCTCGTC CCTACCCACG 000640 000641 TACTCAAGTG TAACGTCCGT ATGCATATCT ATTTGCGGCC ACCTCCCAAC CTGTCATTTA CTGGTAGTGC CTCTGACAGA 000720 000721 AGCCTCCGAG TCTTTTATGG Ctgtgtgtgt gtgtgtgtgt gtgtgtgtgt gtgtgtAATA TAACTTACAA GCCAGAGTGA 000800 000801 GCCCATTAAT GGATTTGGTC AGGCTCCCTC TGGAGAGAGA TGCCCTTGAT CCAG |
Predicted Small Protein
Name | NONHSAT028247_smProtein_395:460 |
Length | 22 |
Molecular weight | 2481.8918 |
Aromaticity | 0.190476190476 |
Instability index | 82.619047619 |
Isoelectric point | 6.68426513672 |
Runs | 6 |
Runs residual | 0.0394557823129 |
Runs probability | 0.0280721898368 |
Amino acid sequence | MFPHQPQFPWHIIAGVSWCLS |
Secondary structure | LLLLLLLLLHHHELLLEELLL |
PRMN | - |
PiMo | - |