NONHSAT028438
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT028438 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
598 nt |
Genomic location |
chr12+:53689332..53691549 |
Exon number |
3 |
Exons |
53689332..53689423,53689623..53690059,53691481..53691549 |
Genome context |
|
Sequence |
000001 GTTAAGTCGG CCTTCCCAAC ATGGCGCAGT CTATTAACAT CACGGAGCTG AATCTGCCGC AGCTAGAAAT GCTCAAGAAC 000080
000081 CAGCTGGACC AGGAAGTGGA GTTCTTGTCC ACGTCCATTG CTCAGCTCAA AGTGGTACAG ACCAAGTATG TGGAAGCCAA 000160 000161 GGACTGTCTG AACGTGCTGA ACAAGAGCAA CGAGGGTATG GGGTAGGCGG GTGAGGGTAA CCTAAAGTGG CGAACCTGCT 000240 000241 TCTCTCGTCC CACCTCCTAA CCCAGTTTTT CTTACCTGAA ACGAGAAAAT CCATTACATA TCGTATACCG CTTCATGAAC 000320 000321 CCTTTGCATG TTGCCTGCCT AGAATTGAAA AGTACAGGAC ATTCCTCTGC TCCTATTGCC CCTGTTTCCG TTCTTTTCAC 000400 000401 ACTGTCTGTG GGTGCTGTGC CCTGTTGGAA CTCTCTTTAA CGTCTTACGT TGGAGCCGCT AACCTTCCCC AGGTGTTTGT 000480 000481 CTTCATTGCT TTCACAGGGA AAGAATTACT CGTCCCACTG ACGAGTTCTT TATAGGTATT GTTCTAAGGC CTCCAGATTA 000560 000561 TTCAGTCCTT ATGCCTTGTA GCTTTTTGGA AAAAGAGG |
Predicted Small Protein
Name | NONHSAT028438_smProtein_20:205 |
Length | 62 |
Molecular weight | 6853.8229 |
Aromaticity | 0.0327868852459 |
Instability index | 40.5229508197 |
Isoelectric point | 4.60101318359 |
Runs | 8 |
Runs residual | 0.0216694931223 |
Runs probability | 0.0486442324679 |
Amino acid sequence | MAQSINITELNLPQLEMLKNQLDQEVEFLSTSIAQLKVVQTKYVEAKDCLNVLNKSNEGM G |
Secondary structure | LLLEEEELLLLLHHHHHHHHHHHHHHHHHHHHHHHHHHLLLEEEEHHHHHHHHHHHLLLL L |
PRMN | - |
PiMo | - |