NONHSAT028516

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT028516

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

2835 nt

Genomic location

chr12-:54375293..54378108

Exon number

1

Exons

54375293..54378108

Genome context

Sequence
000001 GGTGGCACCC GATCCCCGAC CCGAGAGCTG TGGCCTGGGC CTGGCAGGGT GGGCGGCTCC TGGGTCACCA TCTCAGGGGC 000080
000081 CCACAAGGCT TTGGCCTTGG AGCCGGTTCT GCTGCTTTAC TTCAGGCCCT GGCGGTCCTC GCTTTCCGCT TGACCTTGCC 000160
000161 CCCGCTAAAA CAGGGAATAT TCCGGGAAAG AAAGAGGGAA CCTGCGGAGC CTCGGTCAGT TTGGAGGAGT CACGTATCAC 000240
000241 ACGGGAAACC AGCACACAAG ACGCAACAAA ACCCGACCCA GAGAAGCGTC CTTTGCAGAG CGCACGGGCT GGGAGCACGT 000320
000321 TTGAAAGAAG ACAGACCAGT CTATTTTTGT TGTTGTTTTT AAATAAAAGG AAGAAATAAG GGGAACCGTA TGTTTCAAAC 000400
000401 AGTTATTTCC GTTTCTCCAT CGCCTTCTTC CAAAGCGAAC TAAACTCTCC ACCCCTTCCT CAGGAAACGG AATCTGGAGA 000480
000481 ACAACTTGTC TTTCCTGTCG CCCCACATTT TTCCTTGGAC AGAGCCTAGG GTTCAGACTT TCCGAAGGGC TGGAGTTTGG 000560
000561 CGGGGAAAGG ACTGGAGCCC AGCGCCCTGG AGTGGAGGAG TGAGGAGGCT AGACCGTTTC TAAGGAGGCC CAAGCCCGCT 000640
000641 GCGGCTAGAA GACCGCAGAA AGAAATCCGC CGAATTTCCC CATCCAGGGG TGGAGAGAGA AGACGCAGGG GTTCCTGAAC 000720
000721 CTCCGGAAAA CTGGAAGGAA ATGTGGAGTG TATGATTTGC TTGCAGGACC GGCCAGGGGA GATTTGAAAT GGTTTTGTGT 000800
000801 TTTCATATGC AGGGTCACCG TGGCCTCAGC ATGGGGGTTA TCCAGGGCAA GGTTAGGCTG TTTAGGCCCC AGACTTGGGA 000880
000881 CAGTCCGGGC AGCAGTCAAT CCAGGGAGCC ATTTGTCCCA CCGCCCATCC CGCGGGAAAC GGGCGAGACT TTATGGCCAC 000960
000961 TCTGTTTGTA TTATCTGCAT TAGTCTTTCC CCACCAGTTT GATCGAAACC GTTCCCTTTT ACGAGGACCC AACGAAAATT 001040
001041 TCCCGTCATA TTTATCAGCC AGGGATAAAA ATTTAGTATG GGAACTGATA TTTCCTCATT TATGGGACGA TGAAATTAAA 001120
001121 TACCAAAGCA ATTGAGAATT ATATGGCTTT GGGGGTTCCC TCCCCCCTCT TTCACGTCTC CTTTATTTTC CTGCCTGGTG 001200
001201 TGCTTTTCCC AGGAATTTAG CGTCCCAGTT CCCTACCCTT ACCCCCCACT TTGGAGTCTG GTGGGTCCTT TTCCCCACGG 001280
001281 CCAAGTGGCC CTTGGCCACC TCAGCCTTTT CTTTTTTTTT TTTCTCTGGG TGTTAGTAGC TGGGGGCCAG GACAGTGCTA 001360
001361 CCCGAGCCTC TGCCCAGGCC AGCCAGGACA GGCTGGGATC AGAGAAAGGT TTCCAGGGAA GAGCCGCAAA GGGTTTGAGC 001440
001441 CCAGCCTGGG AGGGGGTGAA GGAGTCGGCA GGAAAGGGTG AAGGAGATAA ACTTCAGACA AGCCCCAAGG CGTAGCCTGG 001520
001521 GGAACCAGCA GACAGGGAGC AGACCCATCG GCCTCAGGGG TCCCACCACC CAACCTCTTT CCAAGCCCAC CTCTCACCTT 001600
001601 AGCCAAGGGA GAGGACAGAG TCGCTTCGGA ATTATCGCCA TCATTAATGA AAATAATACT CCAGGGAGGA GCCTCCCGCC 001680
001681 TCGACTCCCA CCTCCTCACA AGACAGAATA GTGTTTAAAG TTGAAATAAT TAGAAGTATG ATAAACACGG CCGATTAATG 001760
001761 AAAAAAGAAA TCAAATTCAT CAGCCTAAGT GGGACCCCCG GTGGGACAAA TGTTTGCCTC TAATTACGCA AGATAAACGA 001840
001841 AAACCCGGTG CTGCTAAACT AGAGCCCGCT CGGACGCAGA CCTGAATAAC TTGTTGGGTT TTCACAGACT TTGAGATTCT 001920
001921 GCTTCAGTGG AGGTAAAAGG AAGGAAAAAG TGAGTGTTTT ATCCTGGCGA AGGGAGCATT TGTGCGGGCC TGGGTCCCAG 002000
002001 CCCTGCCCCC TTGGGCTCGG TCTTTCCCGA GGCCACGAGC AAAGGCTGTT TCGGTCCTAT TGTCCGGGCC TGGCGTTCAA 002080
002081 AGGCATGCGG GCCGCCACAG CGACCCCGCC TGCCGCCACT GCCAGGCACC CACCGCCCTG CCCCACAGGG CCAAGATCCT 002160
002161 TCAGCCTGTG CCCTTGGCAA CTGGATTAGG ATCCAGGGGA GGCCTGTGTT GCTAGAATCA CCCACATATG GACTTTTATT 002240
002241 AATCCATTTC CCCAACTTTC CGAGGGCGCT GAGACACCTA TGCCTATGCC TACGTCTGGG GCTCCCCCCT CTTACCTCAA 002320
002321 CTTGGGAACA TGAAAATCCA GGGGCTGCAA GCCACAGTGG GGCTCAAGCT GTGCATACGA CCTGACAAAT CCCACCCAGG 002400
002401 GCCAATGCCC TGGCCCCTTT CTCCCTTCCC GGGTACCCAG ATCCTGGAAA GGCAACAAGG ACGGGGCTGG GCCTCCTTCT 002480
002481 GTCTGTGGGG CTGTGAGCAA TGCAGAGGAG GAGGGTTCAG GAGCTCTGTG AATACTCTGG GAGGATCCAG CGGGTTCCAC 002560
002561 AGGGCAGCCC AAGGGCTGGG GCGCTAGGGG TCCCCACGTG AAAGCAGAAG AAGGAAAATA TGCTCAATGA ACAAAAAAGG 002640
002641 ACCTTTGTTG CTTTCTTGGC TGTAGCCCTC AACACACCCC AGAAGCACCC TGGTTTCTCC AGCAAAAAAT TGGAGTTTCC 002720
002721 CCAACAGGTT AAGAAAGTCA ACTGGGAAAT TCTGAAGATG AAGTGAAAAA GGAAGAATGT CTTTCCCTTT TGGGTTAAAT 002800
002801 AATAAAATAA AAATAAAGTG AAAAAAAAAA AAAAA
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Predicted Small Protein

Name NONHSAT028516_smProtein_788:982
Length 65
Molecular weight 7366.5116
Aromaticity 0.109375
Instability index 53.6765625
Isoelectric point 8.84197998047
Runs 10
Runs residual 0.00765625
Runs probability 0.0478007419185
Amino acid sequence MVLCFHMQGHRGLSMGVIQGKVRLFRPQTWDSPGSSQSREPFVPPPIPRETGETLWPLCL
YYLH
Secondary structure LEEEEELLLLLLLEEEEEELEEEEELLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHH
EEEL
PRMN -
PiMo -