NONHSAT028652
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT028652 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense |
Length |
709 nt |
Genomic location |
chr12-:55417294..55428599 |
Exon number |
5 |
Exons |
55417294..55417457,55417778..55418039,55419874..55419902,55422997..55423104,55428454..55428599 |
Genome context |
|
Sequence |
000001 CTCCTCAATT CTTCTTTCCT CAGCACCTGT CCGTGACCGT CTATTGTTTG TGGAAACCCA GACACTGTGG GTCAATGCTC 000080
000081 CCTCTCAGGT TGTTTGCCAG CAGCTAAGGG AAGGTCTAGG TCCTTTCTTC CAGAGCTTCT GTTCAGGGCA GATTGTGATG 000160 000161 AAGGGAACCA CTTTGGTGAC TGATGGGGCT TAAGATCTCT CTGCAAGGCT ACTTTCAAGT GAATTTACAA ACCAAGGGTG 000240 000241 CAAAATACAG CAGGAATCCA GAACATAAAA GGGAAAAAAT GAgCTATAGG AAGAAAGAAA GGCACTTTGG CTTCAGGAGA 000320 000321 TGTACAGCAA TAGAAATGAG TCAACAGGAG TGATCATCAT CCAAGAGATC ATCATctctt cctcatcctc cccctttttc 000400 000401 tccttatcct cattctcttA TCTTCATTAT CATTATGATC ACTGGCTCAT ACTGAGATGC ATGAAaagga gagaaggaag 000480 000481 gaaagaagga aggTGCAAGA GAGGAGAGTC TCCTGAATTG TCCCTGGATC TGAATACCAT CCTAGGTGCC GGTCCATTAA 000560 000561 CTTCCAAGAG AATCCCATGA GTAtatagta tggtttcaaa agaatggaag ctagaataac acaaatgtga actctagtcc 000640 000641 caattcttct aattcctggg ttgttgatcc caaacacatt atataaagtt atctgttctt ccatttcct |
Predicted Small Protein
Name | NONHSAT028652_smProtein_182:352 |
Length | 57 |
Molecular weight | 6751.7195 |
Aromaticity | 0.107142857143 |
Instability index | 83.7696428571 |
Isoelectric point | 10.1718139648 |
Runs | 11 |
Runs residual | 0.0431303669009 |
Runs probability | 0.0437201907791 |
Amino acid sequence | MGLKISLQGYFQVNLQTKGAKYSRNPEHKREKMSYRKKERHFGFRRCTAIEMSQQE |
Secondary structure | LLEEEEEEEEEEEEEEELLLEELLLLHHHHHHHLHHHHLLLLLEEEEEEEEEEELL |
PRMN | - |
PiMo | - |