NONHSAT028698
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT028698 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1229 nt |
Genomic location |
chr12+:56224583..56229161 |
Exon number |
4 |
Exons |
56224583..56225133,56226743..56226798,56227231..56227325,56228635..56229161 |
Genome context |
|
Sequence |
000001 ACCCCTCCTC CCCCCACcgc gcgcacgcgc gcgcgcacac acacaaacac aaacacacac cccaacacac acgcCCTGTC 000080
000081 CCCTTTCTCC ACCCTGCAAG CTAGTTGCAT TTAGCTCACA GAGCCTGGGC TGCGACTTGA AAGAGTTTAG GCAGCAACAG 000160 000161 AGTGACCCTG GGGGTGCTCT TGACCGACAG CCGCACCCCC GGCGTCTAGG ACCTCCGAGC AGGGATGCAT CTGGAGGTCT 000240 000241 AGGGAAGCAC TTCCACCCCC TCCTCTCCTC AATCCTGGCA GGATGGTGAG TAGTTAACAT CCCCTCCCCA ACCCCCGCTT 000320 000321 GTCCAGGGTC CCCAGACTTC CAAGCAGATT GAGGAGAGGA GCTCCGAGAG TCAACCCTCC AGCCTGTAAG GACCTTGATA 000400 000401 TCCAAAGGAC AGCTGAAGAA AGTAATGTGC CTGCATTTTT GCCACTTCAT TCCCACAGTG CCCGAAATGC CAGCTCCTCC 000480 000481 TTGGTGTTCT CCTTTCAGGA TTTGAATTCA AATCCCATTG GCAGCCCTGA TACCGCTGGG GGAAGGGTGA GGCTACTGCT 000560 000561 GCTTCAAGAC AGTGACGTTT CTCTCCGGTC AGCTGTCAGG AGCGCTGCTG GGTCTTACTG GGGATCTGGC CAGCCTTGGG 000640 000641 GGCCCTTGGA GCCCTGGCCC AGTGGAAGCT CGTGCCTGAG GAACATGGAG GCCACGCTAA TGAGTTACTT CCAGAGTCTT 000720 000721 CAAGAGTGCC AACTGGGACC AGGACCCCAG ACCACAGCCC CCCACACCGT CCTGGACCTG GATTCTGACT GTGGTTCCAC 000800 000801 TGTACCCCTC ACCTTAATCT CTGGTTCTAA CCAGACCTGA GCCTAGACTT CCACTTTTTC CCTTACCCCT GTGAGGGCCT 000880 000881 GGGAACACTA GGTGGGCAGG GTTTGAGCCC ACAGGACCTG CACACAAACT TCCCCACCTC TTGGACTTGG GGACAGGATC 000960 000961 TGTGCCTCAA CCCAGACCAG CTTTGTAGGG ATATGTTCCA AGAACAGAGA AGAGTCTTAT GGGGAAGGGG GAGGAAGGGA 001040 001041 AGTATGAATA TTTACCTCTG ACCAATAATA GAGGTGCCCT GGTCCCCAAA GAAATTGACT CCCGAATTCC CTCCAAGCCT 001120 001121 TACCCATATA GCttttgttt gtttgtttgt tttcagacaa ggtcttgttc tgtccagtgc cgtggcgtga ccacagctca 001200 001201 tgacaacttt gatttccccg gcccaagcg |
Predicted Small Protein
Name | NONHSAT028698_smProtein_992:1060 |
Length | 23 |
Molecular weight | 2726.1893 |
Aromaticity | 0.136363636364 |
Instability index | 71.3954545455 |
Isoelectric point | 11.5537719727 |
Runs | 5 |
Runs residual | 0.00909090909091 |
Runs probability | 0.0481363716657 |
Amino acid sequence | MFQEQRRVLWGRGRKGSMNIYL |
Secondary structure | LLHHHHHHHHHLLLLLLEEEEL |
PRMN | - |
PiMo | - |