NONHSAT028812
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT028812 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
483 nt |
Genomic location |
chr12-:56711347..56713273 |
Exon number |
2 |
Exons |
56711347..56711427,56712872..56713273 |
Genome context |
|
Sequence |
000001 AGGTGGTGGA TTACTTGACT CAATACTCGG GTATAAAGCC TGGTGACCTC GATGCCAAAA TTTCCTCCAA GCACCTAACA 000080
000081 ACTCTCAAGT CTACCTACTT AAAGCTTCGT TTTCTCATTG ACATTGGAGT CAAGTTTGTG GGTCATGGCC TGCAGAAGGA 000160 000161 CTTCCGGGTC ATCAACCTGA TGGTTTGGCA GGGCTCTTTT AAGAGTCTTC TTGTGAGAGT GGGCCCCTCA GGGTATACAT 000240 000241 TGTGCCTTTA GAGAATGGGG AATTATAGGT CCCCTACCTT AAGTCTCCCC CTCTTTTATC CTTGCCAGGT GCCCAAGGAC 000320 000321 CAAGTCCTTG ACACTGTCTA CCTGTTCCAT ATGCCCCGAA AACGAATGAT TTCCCTGCGA TTCCTTGCTT GGTACTTTCT 000400 000401 GGATGCAGCT GTCTTCTCCT CAGTGCTGGC GCTCTGACTA CCCTTCCCAA AGAACCACGG CCCTCTCCCT TTACTGTTCT 000480 000481 ATA |
Predicted Small Protein
Name | NONHSAT028812_smProtein_254:436 |
Length | 61 |
Molecular weight | 7028.2896 |
Aromaticity | 0.166666666667 |
Instability index | 43.2885 |
Isoelectric point | 9.42706298828 |
Runs | 7 |
Runs residual | 0.0330673758865 |
Runs probability | 0.00784818431877 |
Amino acid sequence | MGNYRSPTLSLPLFYPCQVPKDQVLDTVYLFHMPRKRMISLRFLAWYFLDAAVFSSVLAL |
Secondary structure | LLLLLLLLLLLLLLLLLLLLLLLEELEEEEEELLLHHHHHHHHHHHHHHHHHHHHHHHLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHLL |
PiMo | iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTToo |