NONHSAT029143
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT029143 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
686 nt |
Genomic location |
chr12+:64784476..64790835 |
Exon number |
3 |
Exons |
64784476..64784506,64785357..64785458,64790283..64790835 |
Genome context |
|
Sequence |
000001 CCCGGGCCGC AACTGCAGGA ATCGACGCTA GGACAATCTA TGCAGGAAGA ATGAATGGGT GATGCTGGCA TCTTGAAAAG 000080
000081 TTGAAGCTGA TAGACTGAAG AATGCGGATT ACATACCCTG AGGCTGCAGA GGATTTTTTC TCAGGCAGCC AAGAAGATGG 000160 000161 TGGATTGAGA CTGAGCATGC CTACCACAAG CAGCTGACCA TCATTCAAAG CAAGAAGAGG GTACTGCTAA AGGAAACTGG 000240 000241 CAAGAAGCAG CTCCTATGGT ACTTACAAGA ACATCGGTCT AGGCTTCAAG AGGTCCAAAG AGACTATTGA GGGCACCTAC 000320 000321 ATTGACAAGG AATGCCTGTT CACTGGTAAC GTCTCCATCT GAGGGCAGAT CCTGTATGGC ATGGTGACCA AGATGGAGAT 000400 000401 GCAGAGGACC ACTGTCATCC AGAGAAACTA TCTCCACTAC ATCCGCAAGT ACAATTGCTT CGAGAAGTAC CACAAGAACT 000480 000481 TGTCCATGCA CCTGTTCCTC TGCTTCAGGA TGTCCAGATC AGCGACATTG TCACGTTGGA TAAGTGCCAG TCCCTGAACA 000560 000561 AGACGGTGTA CTTCAATGTG CTCAAGGTCA CCAAGGTCGC AGACATCAAG AAGCAATTCC AGAAGTTCTG AGGCTGAATG 000640 000641 TCTGCCTGCT CCCCAAAATG AAATAAAGTT ATTTTCTCAT TCATAC |
Predicted Small Protein
Name | NONHSAT029143_smProtein_380:556 |
Length | 59 |
Molecular weight | 7148.3939 |
Aromaticity | 0.137931034483 |
Instability index | 77.2224137931 |
Isoelectric point | 10.2251586914 |
Runs | 11 |
Runs residual | 0.0330617658204 |
Runs probability | 0.0398178927592 |
Amino acid sequence | MVTKMEMQRTTVIQRNYLHYIRKYNCFEKYHKNLSMHLFLCFRMSRSATLSRWISASP |
Secondary structure | LLLLLLEEEEEHHHHHHHHHHHHHHHHHHHHHLHHHHHEEEELLLHHHLHHHHHLLLL |
PRMN | - |
PiMo | - |